RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 KRTCAP2Q8N6L1 136 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 RBMXL3Q8N7X1 1067 aaKnown RBP9.82□□□□□ -0.84
RPAIN-204ENST00000405578 OR5L2Q8NGL0 311 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 RFWD2Q8NHY2 731 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 PTPMT1Q8WUK0 201 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-204ENST00000405578 PPWD1Q96BP3 646 aaKnown RBP9.82□□□□□ -0.84
RPAIN-204ENST00000405578 TESCQ96BS2 214 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 SNRNP40Q96DI7 357 aaKnown RBP9.82□□□□□ -0.84
RPAIN-204ENST00000405578 ERP27Q96DN0 273 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 CNRIP1Q96F85 164 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-204ENST00000405578 VMP1Q96GC9 406 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 SENP5Q96HI0 755 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-204ENST00000405578 FBXL20Q96IG2 436 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 IMMP1LQ96LU5 166 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 DUSP26Q9BV47 211 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 CNPPD1Q9BV87 410 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 DEFB126Q9BYW3 111 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 OR8D2Q9GZM6 311 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 LHPPQ9H008 270 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 CXorf21Q9HAI6 301 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 SDR39U1Q9NRG7 319 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-204ENST00000405578 ACSS1Q9NUB1 689 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-204ENST00000405578 TMEM45AQ9NWC5 275 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 ITGB1BP2Q9UKP3 347 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 PCDHGB4Q9UN71 923 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 CFL2Q9Y281 166 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 CLDN16Q9Y5I7 305 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 GPR45Q9Y5Y3 372 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 SEC16AO15027 2179 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 AKAP9Q99996 3911 aa9.82□□□□□ -0.84
RPAIN-204ENST00000405578 A0A1W2PRB8 838 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 A6NL46 340 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 MYO1GB0I1T2 1018 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 BCAS2O75934 225 aaPredicted RBP9.81□□□□□ -0.84
RPAIN-204ENST00000405578 ZFAND5O76080 213 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 IL6P05231 212 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 ALDOCP09972 364 aaKnown RBP9.81□□□□□ -0.84
RPAIN-204ENST00000405578 S100A3P33764 101 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 GPC1P35052 558 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 ATP4BP51164 291 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 SEC24CP53992 1094 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 NME5P56597 212 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 SOX8P57073 446 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 MAP4K2Q12851 820 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 SQLEQ14534 574 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 CEBPEQ15744 281 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 AGAP7PQ5VUJ5 663 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 ANKRD26P1Q6NSI1 321 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 HSDL2Q6YN16 418 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 RNF111Q6ZNA4 994 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 SLC29A4Q7RTT9 530 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 SPATA21Q7Z572 469 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 CAMKMTQ7Z624 323 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 MTERF4Q7Z6M4 381 aaKnown RBP9.81□□□□□ -0.84
RPAIN-204ENST00000405578 RIMKLAQ8IXN7 391 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 OR7G1Q8NGA0 311 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 OR8J2Q8NGG1 315 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 OR1N1Q8NGS0 311 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 SLC2A12Q8TD20 617 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 UCN3Q969E3 161 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 NCLNQ969V3 563 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 COQ8BQ96D53 544 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 THOC3Q96J01 351 aaKnown RBP9.81□□□□□ -0.84
RPAIN-204ENST00000405578 ZNF681Q96N22 645 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 AGAP4Q96P64 663 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 WDR77Q9BQA1 342 aaPredicted RBP9.81□□□□□ -0.84
RPAIN-204ENST00000405578 KCNK13Q9HB14 408 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 NEUROD4Q9HD90 331 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 GPR83Q9NYM4 423 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 ABI3Q9P2A4 366 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 PPIEQ9UNP9 301 aaKnown RBP9.81□□□□□ -0.84
RPAIN-204ENST00000405578 EXO1Q9UQ84 846 aaKnown RBP9.81□□□□□ -0.84
RPAIN-204ENST00000405578 PCDHGB7Q9Y5F8 929 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 PCSK5Q92824 1860 aa9.81□□□□□ -0.84
RPAIN-204ENST00000405578 TACC2O95359 2948 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 TRBV11-1A0A0K0K1C0 115 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 OR6C76A6NM76 312 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 A8MUI8 341 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 PRSS44E7EML9 344 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 CFLARO15519 480 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 PRAMEF2O60811 474 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 CCDC22O60826 627 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 COQ9O75208 318 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 CEACAM4O75871 244 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 LAMP1P11279 417 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 MRPL19P49406 292 aaKnown RBP9.8□□□□□ -0.84
RPAIN-204ENST00000405578 KCNK10P57789 538 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 UFM1P61960 85 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 MYBPC3Q14896 1274 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 MLC1Q15049 377 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 ZNF750Q32MQ0 723 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 FAM174BQ3ZCQ3 159 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 CRB2Q5IJ48 1285 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 ABHD17BQ5VST6 288 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 HLA-DQA1Q5Y7H0 255 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 SP5Q6BEB4 398 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-204ENST00000405578 FAM180BQ6P0A1 224 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 BHLHB9Q6PI77 547 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 CISD2Q8N5K1 135 aaKnown RBP9.8□□□□□ -0.84
RPAIN-204ENST00000405578 NFAM1Q8NET5 270 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms