RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 LCN1P31025 176 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 HNRNPFP52597 415 aaKnown RBP7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 SEC24CP53992 1094 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 HSPB3Q12988 150 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 MPEG1Q2M385 716 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 DEFB109BQ30KR1 87 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 AGKQ53H12 422 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 OPN5Q6U736 354 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 ISLR2Q6UXK2 745 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 LANCL3Q6ZV70 420 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 SZRD1Q7Z422 152 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 ARPINQ7Z6K5 226 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 OR4N5Q8IXE1 308 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 CCDC116Q8IYX3 515 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 ARMC10Q8N2F6 343 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 OR2L13Q8N349 312 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 CDRT4Q8N9R6 151 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 LSM14AQ8ND56 463 aaKnown RBP7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 TMEM52Q8NDY8 209 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 OR7A2PQ8NGA2 310 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 OR4A15Q8NGL6 344 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 RP9Q8TA86 221 aaKnown RBP7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 ELP5Q8TE02 316 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 PTPMT1Q8WUK0 201 aaPredicted RBP7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 OIT3Q8WWZ8 545 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 NCLNQ969V3 563 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 CTHRC1Q96CG8 243 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 SPDL1Q96EA4 605 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 HSPBAP1Q96EW2 488 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 THOC3Q96J01 351 aaKnown RBP7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 EGLN2Q96KS0 407 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 LMF1Q96S06 567 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 OR10A5Q9H207 317 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 GLIPR2Q9H4G4 154 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 CACYBPQ9HB71 228 aaKnown RBP7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 Q9N2J8 555 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 GID8Q9NWU2 228 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 GIN1Q9NXP7 522 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 CCDC167Q9P0B6 97 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 NTMQ9P121 344 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 BCAP29Q9UHQ4 241 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 C19orf53Q9UNZ5 99 aaPredicted RBP7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 ERVK-19Q9WJR5 959 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 YARS2Q9Y2Z4 477 aaKnown RBP7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 NDUFAF1Q9Y375 327 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 SNX8Q9Y5X2 465 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 SEC16AO15027 2179 aa7.8□□□□□ -1.16
SNRPD3-203ENST00000404603 SPTBP11277 2137 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 ACACAQ13085 2346 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 NR5A2O00482 541 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 ASNA1O43681 348 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 HS6ST1O60243 411 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 DPM1O60762 260 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 PRKRAO75569 313 aaKnown RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 CEACAM4O75871 244 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 IGKV3-11P04433 115 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 LAMP1P11279 417 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 NAGAP17050 411 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 ENDOUP21128 410 aaKnown RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 GPX3P22352 226 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 SOAT1P35610 550 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 CHI3L1P36222 383 aaPredicted RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 CCT3P49368 545 aaKnown RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 MMP16P51512 607 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 SSR4P51571 173 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 SLC37A1P57057 533 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 UFM1P61960 85 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 RNF4P78317 190 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 HPCAP84074 193 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 CYLC2Q14093 348 aaPredicted RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 ZNF628Q5EBL2 1059 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 SPANXN4Q5MJ08 99 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 C6orf10Q5SRN2 563 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 ATAD3BQ5T9A4 648 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 TMEM198Q66K66 360 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 PIGWQ7Z7B1 504 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 RPS19BP1Q86WX3 136 aaKnown RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 KRTCAP2Q8N6L1 136 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 APCDD1LQ8NCL9 501 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 OR9A2Q8NGT5 310 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 GOT1L1Q8NHS2 421 aaPredicted RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 BCAS4Q8TDM0 211 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 TMEM125Q96AQ2 219 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 C8orf44Q96CB5 159 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 ELP4Q96EB1 424 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 RNF31Q96EP0 1072 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 THOC1Q96FV9 657 aaKnown RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 STACQ99469 402 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 G6PC3Q9BUM1 346 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 PRORYQ9H606 182 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 CPNE5Q9HCH3 593 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 ZCCHC3Q9NUD5 404 aaKnown RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 EXD2Q9NVH0 621 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 MAT2BQ9NZL9 334 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 GIMAP2Q9UG22 337 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 CLDN16Q9Y5I7 305 aa7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 KMT2BQ9UMN6 2715 aaPredicted RBP7.79□□□□□ -1.16
SNRPD3-203ENST00000404603 SCN3AQ9NY46 2000 aa7.78□□□□□ -1.16
SNRPD3-203ENST00000404603 CFAP47Q6ZTR5 3102 aa7.78□□□□□ -1.16
SNRPD3-203ENST00000404603 FRG2CA6NGY1 282 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms