RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZC3H7AQ8IWR0 971 aaKnown RBP19.67■□□□□ 0.74
TPM1-208ENST00000404484 ANKRD9Q96BM1 317 aaPredicted RBP19.67■□□□□ 0.74
TPM1-208ENST00000404484 OR1F2PQ96R84 312 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 PELOQ9BRX2 385 aaKnown RBP19.67■□□□□ 0.74
TPM1-208ENST00000404484 ASPSCR1Q9BZE9 553 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 VCXQ9H320 206 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 OR51I1Q9H343 314 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 AGPAT4Q9NRZ5 378 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 TRPC4Q9UBN4 977 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 ADAMTS20P59510 1910 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 A0A1B0GX78 115 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 HMGN4O00479 90 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 ASNA1O43681 348 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 OR10H2O60403 315 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 PDE9AO76083 593 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 ZNF682O95780 498 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 LDLRP01130 860 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 CAPNS1P04632 268 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 HMGN2P05204 90 aaKnown RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 NT5EP21589 574 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 RPS26P62854 115 aaKnown RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 MAT1AQ00266 395 aaKnown RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 ID2Q02363 134 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 STX4Q12846 297 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 ZNF628Q5EBL2 1059 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 ENPP6Q6UWR7 440 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 FKBP9P1Q75LS8 142 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 BPHLQ86WA6 291 aaPredicted RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 SLITRK4Q8IW52 837 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 OR2L13Q8N349 312 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 METTL27Q8N6F8 245 aaPredicted RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 KAT2AQ92830 837 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 CENPNQ96H22 339 aaPredicted RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 DEPDC7Q96QD5 511 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 RARRES3Q9UL19 164 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 SPTBP11277 2137 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 TPST1O60507 370 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 PLOD3O60568 738 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 CSO75390 466 aaKnown RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 DEAF1O75398 565 aaPredicted RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 AGR2O95994 175 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 FBLP22087 321 aaKnown RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 PEX2P28328 305 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 XCR1P46094 333 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 IGLV3-21P80748 117 aaPredicted RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 LASP1Q14847 261 aaKnown RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 ATP6AP1Q15904 470 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 ISXQ2M1V0 245 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 GRAMD1BQ3KR37 738 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 PHF19Q5T6S3 580 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 RBM44Q6ZP01 1051 aaKnown RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 ST13P4Q8IZP2 240 aaPredicted RBP19.66■□□□□ 0.74
TPM1-208ENST00000404484 LGI4Q8N135 537 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 ANKFN1Q8N957 763 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 LZICQ8WZA0 190 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 ACTRT3Q9BYD9 372 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 SLC7A5P2Q9GIP4 190 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 MMACHCQ9Y4U1 282 aa19.66■□□□□ 0.74
TPM1-208ENST00000404484 DUXAA6NLW8 204 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 UPK1AO00322 258 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 SUV39H1O43463 412 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 CLCN2P51788 898 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 PCBP3P57721 371 aaKnown RBP19.65■□□□□ 0.74
TPM1-208ENST00000404484 SERTAD2Q14140 314 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 MYBPC3Q14896 1274 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 CYBRD1Q53TN4 286 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 CRB2Q5IJ48 1285 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 LPCAT4Q643R3 524 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 FAM86B1Q8N7N1 296 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 OR7G2Q8NG99 324 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 SLC38A5Q8WUX1 472 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 OR6C1Q96RD1 312 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 BDH2Q9BUT1 245 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 RBCK1Q9BYM8 510 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 SERHL2Q9H4I8 314 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 ZNF304Q9HCX3 659 aa19.65■□□□□ 0.74
TPM1-208ENST00000404484 C19orf53Q9UNZ5 99 aaPredicted RBP19.65■□□□□ 0.74
TPM1-208ENST00000404484 HBQ1P09105 142 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 TFPTP0C1Z6 253 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 OR12D1P0DN82 309 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 AQP1P29972 269 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 CSTF2P33240 577 aaKnown RBP eCLIP19.64■□□□□ 0.73
TPM1-208ENST00000404484 PTGER1P34995 402 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 PDX1P52945 283 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 SYT16Q17RD7 645 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 ATAD3BQ5T9A4 648 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 RHBDD2Q6NTF9 364 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 AMIGO2Q86SJ2 522 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 KDF1Q8NAX2 398 aaPredicted RBP19.64■□□□□ 0.73
TPM1-208ENST00000404484 RCBTB1Q8NDN9 531 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 EME1Q96AY2 570 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 ZNF184Q99676 751 aaPredicted RBP19.64■□□□□ 0.73
TPM1-208ENST00000404484 SIDT1Q9NXL6 827 aaKnown RBP19.64■□□□□ 0.73
TPM1-208ENST00000404484 DHCR7Q9UBM7 475 aaKnown RBP19.64■□□□□ 0.73
TPM1-208ENST00000404484 LIPT1Q9Y234 373 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 C15orf41Q9Y2V0 281 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 DTNAQ9Y4J8 743 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 TMEM184BQ9Y519 407 aaPredicted RBP19.64■□□□□ 0.73
TPM1-208ENST00000404484 MAU2Q9Y6X3 613 aa19.64■□□□□ 0.73
TPM1-208ENST00000404484 KIF26BQ2KJY2 2108 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms