RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CCT8L2Q96SF2 557 aa27.23■■□□□ 1.95
USP42-202ENST00000404008 C19orf53Q9UNZ5 99 aaPredicted RBP27.23■■□□□ 1.95
USP42-202ENST00000404008 TNRC6AQ8NDV7 1962 aaKnown RBP27.23■■□□□ 1.95
USP42-202ENST00000404008 TMEM200CA6NKL6 621 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 UPK1AO00322 258 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 CFLARO15519 480 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 FAM87AP0C7U9 286 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 EBPQ15125 230 aaKnown RBP27.22■■□□□ 1.95
USP42-202ENST00000404008 TIGD2Q4W5G0 525 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 SLC29A4Q7RTT9 530 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 NUBPLQ8TB37 319 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 THAP3Q8WTV1 239 aaPredicted RBP27.22■■□□□ 1.95
USP42-202ENST00000404008 CCDC115Q96NT0 180 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 SMAD5Q99717 465 aaKnown RBP27.22■■□□□ 1.95
USP42-202ENST00000404008 WWTR1Q9GZV5 400 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 CXorf36Q9H7Y0 433 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 DDX18Q9NVP1 670 aaKnown RBP27.22■■□□□ 1.95
USP42-202ENST00000404008 TAS2R9Q9NYW1 312 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 NTMQ9P121 344 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 BTNL2Q9UIR0 455 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 ERVK-11Q9UQG0 969 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 PSMG1O95456 288 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 FAM107AO95990 144 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 ABCB1P08183 1280 aaPredicted RBP27.22■■□□□ 1.95
USP42-202ENST00000404008 CD1EP15812 388 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 EMDP50402 254 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 KCNK10P57789 538 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 KCNAB2Q13303 367 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 UBAP2LQ14157 1087 aaKnown RBP27.22■■□□□ 1.95
USP42-202ENST00000404008 TCTN3Q6NUS6 607 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 MSANTD1Q6ZTZ1 278 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 RPS19BP1Q86WX3 136 aaKnown RBP27.22■■□□□ 1.95
USP42-202ENST00000404008 LGI4Q8N135 537 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 OR5L2Q8NGL0 311 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 VPS33AQ96AX1 596 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 MAGED4Q96JG8 741 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 ZNF354BQ96LW1 612 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 TRIM4Q9C037 500 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 NMUR2Q9GZQ4 415 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 TEKT2Q9UIF3 430 aa27.22■■□□□ 1.95
USP42-202ENST00000404008 NUP214P35658 2090 aaPredicted RBP27.21■■□□□ 1.95
USP42-202ENST00000404008 PIEZO2Q9H5I5 2752 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 ERVH48-1M5A8F1 160 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 NR5A2O00482 541 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 MAN1A2O60476 641 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 ALPPP05187 535 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 LRRC74AQ0VAA2 488 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 ACER2Q5QJU3 275 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 ISLR2Q6UXK2 745 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 OR4A15Q8NGL6 344 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 SPDL1Q96EA4 605 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 ABHD17AQ96GS6 310 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 ADNPQ9H2P0 1102 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 CDCP1Q9H5V8 836 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 C3orf14Q9HBI5 128 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 SLC52A3Q9NQ40 469 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 MYOTQ9UBF9 498 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 PRODH2Q9UF12 536 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 TUBD1Q9UJT1 453 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 PCDHGB4Q9UN71 923 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 CFL2Q9Y281 166 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 DTX4Q9Y2E6 619 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 SNX8Q9Y5X2 465 aa27.21■■□□□ 1.95
USP42-202ENST00000404008 COQ9O75208 318 aa27.2■■□□□ 1.94
USP42-202ENST00000404008 MLF1P58340 268 aa27.2■■□□□ 1.94
USP42-202ENST00000404008 MEP1AQ16819 746 aa27.2■■□□□ 1.94
USP42-202ENST00000404008 TMEM64Q6YI46 380 aa27.2■■□□□ 1.94
USP42-202ENST00000404008 FAM120BQ96EK7 910 aaKnown RBP27.2■■□□□ 1.94
USP42-202ENST00000404008 GAL3ST4Q96RP7 486 aa27.2■■□□□ 1.94
USP42-202ENST00000404008 LIN28AQ9H9Z2 209 aaKnown RBP27.2■■□□□ 1.94
USP42-202ENST00000404008 SERHLQ9NQF3 203 aa27.2■■□□□ 1.94
USP42-202ENST00000404008 HEMK1Q9Y5R4 338 aaPredicted RBP27.2■■□□□ 1.94
USP42-202ENST00000404008 C2orf92A0A1B0GVN3 265 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 CCDC154A6NI56 674 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 EMC8O43402 210 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 CPSF4O95639 269 aaKnown RBP27.19■■□□□ 1.94
USP42-202ENST00000404008 CAPN3P20807 821 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 ABHD17BQ5VST6 288 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 C16orf47Q6ZP98 133 aaPredicted RBP27.19■■□□□ 1.94
USP42-202ENST00000404008 LINC00696Q6ZRV3 163 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 GK5Q6ZS86 529 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 ZNF441Q8N8Z8 693 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 GOT1L1Q8NHS2 421 aaPredicted RBP27.19■■□□□ 1.94
USP42-202ENST00000404008 ADIPOR1Q96A54 375 aa27.19■■□□□ 1.94
USP42-202ENST00000404008 ZBTB20Q9HC78 741 aaPredicted RBP27.19■■□□□ 1.94
USP42-202ENST00000404008 FCHO1O14526 889 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 CCDC22O60826 627 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 NME6O75414 186 aaPredicted RBP27.18■■□□□ 1.94
USP42-202ENST00000404008 PRR5P85299 388 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 KLF10Q13118 480 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 MFAP5Q13361 173 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 MAPKAPK3Q16644 382 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 VPS26BQ4G0F5 336 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 IGFL2Q6UWQ7 119 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 NUP43Q8NFH3 380 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 SFXN5Q8TD22 340 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 VSTM2LQ96N03 204 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 PANX1Q96RD7 426 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 LMF1Q96S06 567 aa27.18■■□□□ 1.94
USP42-202ENST00000404008 INPP5KQ9BT40 448 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms