RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	EFNA3	P52797	238 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NUP107	P57740	925 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TBPL1	P62380	186 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PPIA	P62937	165 aa	Known RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	BASP1	P80723	227 aa	Known RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SARNP	P82979	210 aa	Known RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TFF3	Q07654	80 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KCNJ11	Q14654	390 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RPS6KA1	Q15418	735 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TYSND1	Q2T9J0	566 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	DEFB134	Q4QY38	66 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CMPK2	Q5EBM0	449 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ACSBG2	Q5FVE4	666 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NDUFAF5	Q5TEU4	345 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CAPN13	Q6MZZ7	669 aa	Predicted RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CRIP3	Q6Q6R5	217 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	B3GNT6	Q6ZMB0	384 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	QSOX2	Q6ZRP7	698 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KIAA1328	Q86T90	577 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	BIVM	Q86UB2	503 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SLC22A16	Q86VW1	577 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CHERP	Q8IWX8	916 aa	Known RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KIF2B	Q8N4N8	673 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MARVELD2	Q8N4S9	558 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PRELID2	Q8N945	189 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZFP62	Q8NB50	900 aa	Predicted RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	C16orf52	Q8NHV5	167 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZNF483	Q8TF39	744 aa	Predicted RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ATG4A	Q8WYN0	398 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	LRTOMT	Q8WZ04	291 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NRGN	Q92686	78 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KCNJ9	Q92806	393 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CCDC138	Q96M89	665 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SMC6	Q96SB8	1091 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MACROD1	Q9BQ69	325 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HAUS8	Q9BT25	410 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	H2AFJ	Q9BTM1	129 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ALOXE3	Q9BYJ1	711 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SYNPO2L	Q9H987	977 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	INTS10	Q9NVR2	710 aa	Known RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HPF1	Q9NWY4	346 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	VSX1	Q9NZR4	365 aa	Predicted RBP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FBXW2	Q9UKT8	454 aa		6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TRBV11-1	A0A0K0K1C0	115 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GRID2IP	A4D2P6	1211 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FAM166B	A8MTA8	275 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GOLGA8K	D6RF30	607 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NPIPA2	E9PIF3	369 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NPIPA3	F8WFD2	350 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GOLGA8T	H3BQL2	631 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	EIF3F	O00303	357 aa	Predicted RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CHST10	O43529	356 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	LIAS	O43766	372 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CEP104	O60308	925 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GALR3	O60755	368 aa	Predicted RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CTAG2	O75638	210 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FSHB	P01225	129 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	C8G	P07360	202 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KIT	P10721	976 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ALOX12	P18054	663 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NMBR	P28336	390 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	IMPA1	P29218	277 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SLC7A1	P30825	629 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	COIL	P38432	576 aa	Predicted RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CCR8	P51685	355 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ARFIP2	P53365	341 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CRADD	P78560	199 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KIF5A	Q12840	1032 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CUL1	Q13616	776 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	THOC5	Q13769	683 aa	Known RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ARMC3	Q5W041	872 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KIAA0930	Q6ICG6	404 aa	Predicted RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	UGT3A1	Q6NUS8	523 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	NEPRO	Q6NW34	567 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CASC4	Q6P4E1	433 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ARSK	Q6UWY0	536 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GSTA5	Q7RTV2	222 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	WDR53	Q7Z5U6	358 aa	Predicted RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SLC26A11	Q86WA9	606 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	AMER2	Q8N7J2	671 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	LRRC57	Q8N9N7	239 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MFSD9	Q8NBP5	474 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PSD4	Q8NDX1	1056 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ACRBP	Q8NEB7	543 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	OR5M9	Q8NGP3	310 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GABPB2	Q8TAK5	448 aa	Predicted RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SARAF	Q96BY9	339 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TM4SF19	Q96DZ7	209 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	VMP1	Q96GC9	406 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TRIB1	Q96RU8	372 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GPATCH1	Q9BRR8	931 aa	Known RBP	6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KIFC1	Q9BW19	673 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TRIM54	Q9BYV2	358 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ATG10	Q9H0Y0	220 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	DEFB127	Q9H1M4	99 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	EXO5	Q9H790	373 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GALNT9	Q9HCQ5	603 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	B4GALT7	Q9UBV7	327 aa		6.24	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ACAD8	Q9UKU7	415 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms