RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 H0YC42 278 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CLGNO14967 610 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ICOSLGO75144 302 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 STK16O75716 305 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SMNDC1O75940 238 aaKnown RBP eCLIP10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TTC4O95801 387 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 IVDP26440 423 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ELK3P41970 407 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PCYT1AP49585 367 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TPD52P55327 224 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 B3GALT5-AS1P59052 145 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PCDH1Q08174 1060 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TGM3Q08188 693 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TBCCQ15814 346 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PDK4Q16654 411 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TMEM35AQ53FP2 167 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CCDC137Q6PK04 289 aaKnown RBP10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PLEKHM3Q6ZWE6 761 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ADAMTSL2Q86TH1 951 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 HIPK1Q86Z02 1210 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MEIOBQ8N635 442 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FIG4Q92562 907 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CFAP36Q96G28 342 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MED18Q9BUE0 208 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 EFCAB11Q9BUY7 163 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CAPS2Q9BXY5 557 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RBSNQ9H1K0 784 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CAB39LQ9H9S4 337 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PPANQ9NQ55 473 aaKnown RBP10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SMYD2Q9NRG4 433 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SNX15Q9NRS6 342 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 EHD3Q9NZN3 535 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FBXL2Q9UKC9 423 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CHMP2BQ9UQN3 213 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 A0A0A6YYD5 115 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PHF1O43189 567 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR10H2O60403 315 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZIC3O60481 467 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 UGT2B11O75310 529 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PPM1BO75688 479 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 AIFM1O95831 613 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 F12P00748 615 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SLC35E2BP0CK96 405 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SLC35E2P0CK97 266 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PCNAP12004 261 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZNF708P17019 499 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GPX3P22352 226 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TCEA1P23193 301 aaKnown RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CNTFP26441 200 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 HPDP32754 393 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GALNSP34059 522 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 BSGP35613 385 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DIO3P55073 304 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ATP5J2P56134 94 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SIRPAP78324 504 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SRSF2Q01130 221 aaKnown RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 IRF8Q02556 426 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MGAT2Q10469 447 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SETDB1Q15047 1291 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 KRTAP24-1Q3LI83 254 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TMEM81Q6P7N7 255 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PODNL1Q6PEZ8 512 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FRA10AC1Q70Z53 315 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GRAMD2AQ8IUY3 354 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TXLNBQ8N3L3 684 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZCCHC7Q8N3Z6 543 aaKnown RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CNEP1R1Q8N9A8 125 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZNF610Q8N9Z0 462 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SRFBP1Q8NEF9 429 aaKnown RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PGM2Q96G03 612 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FAM111AQ96PZ2 611 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 KRT12Q99456 494 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR10A5Q9H207 317 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 LZTFL1Q9NQ48 299 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZNF226Q9NYT6 803 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 EXO1Q9UQ84 846 aaKnown RBP10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TEX264Q9Y6I9 313 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SPACA6W5XKT8 324 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TGP01266 2768 aa10.74□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FRG2CA6NGY1 282 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DNALI1O14645 258 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DYRK3O43781 588 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GBAP04062 536 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CD1DP15813 335 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RPS13P62277 151 aaKnown RBP10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DUSP2Q05923 314 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 BIKQ13323 160 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GAB1Q13480 694 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DDX39BQ13838 428 aaKnown RBP10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GUSBP1Q15486 140 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CLEC12BQ2HXU8 276 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FAM111BQ6SJ93 734 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZNF704Q6ZNC4 412 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PDPRQ8NCN5 879 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR14L1PQ8NHC6 308 aa10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 LILRB1Q8NHL6 650 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1P3-201ENST00000403408 HUS1BQ8NHY5 278 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms