RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 DDI2Q5TDH0 399 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 KIAA1211LQ6NV74 962 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 FAM180BQ6P0A1 224 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 FGF14Q92915 247 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 DIRAS2Q96HU8 199 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 GUCD1Q96NT3 240 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 ZNF607Q96SK3 696 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 MARK1Q9P0L2 795 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 DKK3Q9UBP4 350 aa18.74■□□□□ 0.59
CCDC47-202ENST00000403162 DENND4AQ7Z401 1863 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 LINC00854A0A1B0GVQ3 168 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 A0A1W2PRQ8 180 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 B4DXG7 233 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 HMGN4O00479 90 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 PDPK1O15530 556 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 TLX2O43763 284 aaPredicted RBP18.73■□□□□ 0.59
CCDC47-202ENST00000403162 YES1P07947 543 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 ADH5P11766 374 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 TNNI3P19429 210 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 ETV5P41161 510 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 MLLT3P42568 568 aaPredicted RBP18.73■□□□□ 0.59
CCDC47-202ENST00000403162 ETV1P50549 477 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 C22orf42Q6IC83 251 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 C6orf120Q7Z4R8 191 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 NOXA1Q86UR1 476 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 ADGRF3Q8IZF5 1079 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 ELSPBP1Q96BH3 223 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 TTYH2Q9BSA4 534 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 PAQR5Q9NXK6 330 aaPredicted RBP18.73■□□□□ 0.59
CCDC47-202ENST00000403162 A4GNTQ9UNA3 340 aa18.73■□□□□ 0.59
CCDC47-202ENST00000403162 ANHXE9PGG2 379 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 PLPP1O14494 284 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 POLR1CO15160 346 aaPredicted RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 PI15O43692 258 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 TMCC2O75069 709 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 NME6O75414 186 aaPredicted RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 NFATC1O95644 943 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 CLEC2LP0C7M8 214 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 MYL9P24844 172 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 CNTN1Q12860 1018 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 PDGFRLQ15198 375 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 PLK5Q496M5 336 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 FLYWCH1Q4VC44 716 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 TMEM215Q68D42 235 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 IQCF1Q8N6M8 205 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 ZNF557Q8N988 423 aaPredicted RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 FGF11Q92914 225 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 RAB8BQ92930 207 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 KCTD7Q96MP8 289 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 ZNF582Q96NG8 517 aaPredicted RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 SIRT3Q9NTG7 399 aaPredicted RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 ZSCAN32Q9NX65 697 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 IL36AQ9UHA7 158 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 B4GALT2O60909 372 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 FRKP42685 505 aaPredicted RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 WNT4P56705 351 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 DAB2P98082 770 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 EFNB1P98172 346 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 KLHL22Q53GT1 634 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 PRAMEF14Q5SWL7 426 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 PRAMEF13Q5VWM6 474 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 LAPTM4BQ86VI4 370 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 FAM129CQ86XR2 697 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 KRT78Q8N1N4 520 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 FRMD6Q96NE9 622 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 WFDC6Q9BQY6 131 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 ZNF717Q9BY31 904 aaPredicted RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 MVB12BQ9H7P6 319 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 RNF121Q9H920 327 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 RANGRFQ9HD47 186 aaPredicted RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 ISYNA1Q9NPH2 558 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 MRPS18AQ9NVS2 196 aaKnown RBP18.72■□□□□ 0.59
CCDC47-202ENST00000403162 SEC14L3Q9UDX4 400 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 MAU2Q9Y6X3 613 aa18.72■□□□□ 0.59
CCDC47-202ENST00000403162 ACADMP11310 421 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 MAPK12P53778 367 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 GAS1P54826 345 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 PCBP4P57723 403 aaKnown RBP18.71■□□□□ 0.59
CCDC47-202ENST00000403162 SMAD4Q13485 552 aaKnown RBP18.71■□□□□ 0.59
CCDC47-202ENST00000403162 PODNL1Q6PEZ8 512 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 LCTLQ6UWM7 567 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 MTSS1LQ765P7 747 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 LINC00471Q8N535 108 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 HCAR2Q8TDS4 363 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 SMPDL3AQ92484 453 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 AP3S1Q92572 193 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 TM4SF18Q96CE8 201 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 LRR1Q96L50 414 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 MRGPRX3Q96LB0 322 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 RPP25Q9BUL9 199 aaKnown RBP18.71■□□□□ 0.59
CCDC47-202ENST00000403162 ZCCHC2Q9C0B9 1178 aaKnown RBP18.71■□□□□ 0.59
CCDC47-202ENST00000403162 NUFIP1Q9UHK0 495 aaKnown RBP18.71■□□□□ 0.59
CCDC47-202ENST00000403162 BOLA1Q9Y3E2 137 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 SPIN1Q9Y657 262 aaPredicted RBP18.71■□□□□ 0.59
CCDC47-202ENST00000403162 FAM25AB3EWG3 89 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 FAM25CB3EWG5 89 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 FAM25GB3EWG6 89 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 TBX6O95947 436 aaPredicted RBP18.71■□□□□ 0.59
CCDC47-202ENST00000403162 TSPAN19P0C672 248 aa18.71■□□□□ 0.59
CCDC47-202ENST00000403162 SDC2P34741 201 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms