RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TBR1Q16650 682 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 C16orf47Q6ZP98 133 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-204ENST00000401473 GPR155Q7Z3F1 870 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 C9orf40Q8IXQ3 194 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 KBTBD2Q8IY47 623 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 OR2L13Q8N349 312 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 GALNT16Q8N428 558 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 OR52R1Q8NGF1 315 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 C16orf52Q8NHV5 167 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 ZFP28Q8NHY6 868 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 EXTL1Q92935 676 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 VMP1Q96GC9 406 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 CCDC115Q96NT0 180 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 BTNL2Q9UIR0 455 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 SNX8Q9Y5X2 465 aa14.81□□□□□ -0.04
HMGA1-204ENST00000401473 A0A087WV62 115 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 TRBV11-1A0A0K0K1C0 115 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 A0A1W2PP18 115 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 SNRPB2P08579 225 aaKnown RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 PTPN6P29350 595 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 ADSLP30566 484 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 CLCN2P51788 898 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 RNF4P78317 190 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 CBX1P83916 185 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 RAPSNQ13702 412 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 H3F3CQ6NXT2 135 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 RETREG3Q86VR2 466 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 GOT1L1Q8NHS2 421 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 BRIX1Q8TDN6 353 aaKnown RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 THAP3Q8WTV1 239 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 APOBEC4Q8WW27 367 aaKnown RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 FAM120BQ96EK7 910 aaKnown RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 NPAS2Q99743 824 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 NTMQ9P121 344 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 BCAP29Q9UHQ4 241 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 C19orf53Q9UNZ5 99 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 CAPN14A8MX76 684 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 FBP2O00757 339 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 MAN1A2O60476 641 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 PSMG1O95456 288 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 GSNP06396 782 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 ITGA3P26006 1051 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 B3GNTL1Q67FW5 361 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-204ENST00000401473 FCRLBQ6BAA4 426 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 HSDL2Q6YN16 418 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 FITM2Q8N6M3 262 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 SIRT6Q8N6T7 355 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 CCDC197Q8NCU1 140 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 FDCSPQ8NFU4 85 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 OR7G1Q8NGA0 311 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 OR4A15Q8NGL6 344 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 OR5AK3PQ8NH89 298 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 LRRC37BQ96QE4 947 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 PANX1Q96RD7 426 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 PTGFRNQ9P2B2 879 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 MAP10Q9P2G4 905 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 COPS7AQ9UBW8 275 aa14.8□□□□□ -0.04
HMGA1-204ENST00000401473 TNRC6AQ8NDV7 1962 aaKnown RBP14.79□□□□□ -0.04
HMGA1-204ENST00000401473 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 A8MUI8 341 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 SLITRK5O94991 958 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 CCT3P49368 545 aaKnown RBP14.79□□□□□ -0.04
HMGA1-204ENST00000401473 ST13P50502 369 aaKnown RBP14.79□□□□□ -0.04
HMGA1-204ENST00000401473 PRKAG1P54619 331 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 RNF111Q6ZNA4 994 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 POU5F2Q8N7G0 328 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 TSPEARQ8WU66 669 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 ERP27Q96DN0 273 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 GIMAP5Q96F15 307 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 ART5Q96L15 291 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 LHPPQ9H008 270 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 ZNF552Q9H707 407 aaPredicted RBP14.79□□□□□ -0.04
HMGA1-204ENST00000401473 NEUROD4Q9HD90 331 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 MRGBPQ9NV56 204 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 DDX18Q9NVP1 670 aaKnown RBP14.79□□□□□ -0.04
HMGA1-204ENST00000401473 PCDHGB4Q9UN71 923 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 CAPN7Q9Y6W3 813 aa14.79□□□□□ -0.04
HMGA1-204ENST00000401473 RFXANKO14593 260 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 SLC22A2O15244 555 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 ZNF354AO60765 605 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 GAB1Q13480 694 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 EBPQ15125 230 aaKnown RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 LINC00303Q3SY05 128 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 GTDC1Q4AE62 458 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 TCTN3Q6NUS6 607 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 BORAQ6PGQ7 559 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 ZNF621Q6ZSS3 439 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 MSANTD1Q6ZTZ1 278 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 WDR53Q7Z5U6 358 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 NUP43Q8NFH3 380 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 ADIPOR1Q96A54 375 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 DEFB126Q9BYW3 111 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 PAIP1Q9H074 479 aaKnown RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 ZBTB20Q9HC78 741 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 NDUFAF1Q9Y375 327 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 PCDHB14Q9Y5E9 798 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 SPTA1P02549 2419 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 EMC8O43402 210 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 CEACAM4O75871 244 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 ZFAND5O76080 213 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms