RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 CNOT9Q92600 299 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 NKD1Q969G9 470 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 ISL2Q96A47 359 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 ZBED6CLQ96FA7 236 aaPredicted RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 BTN2A3PQ96KV6 586 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 DUSP26Q9BV47 211 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 UTRNP46939 3433 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 SLC7A4O43246 635 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 CLDN9O95484 217 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 HOXB6P17509 224 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 NTSP30990 170 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 NKG7Q16617 165 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 DEFB115Q30KQ5 88 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 FRMPD2BQ6IN97 320 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 CLEC9AQ6UXN8 241 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 CLECL1Q8IZS7 167 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 C10orf53Q8N6V4 93 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 AHCYL2Q96HN2 611 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 MEGF10Q96KG7 1140 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 CNTNAP3BQ96NU0 1288 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 OR2M2Q96R28 347 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 AARSD1Q9BTE6 412 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 TDP1Q9NUW8 608 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 ZNF223Q9UK11 482 aaPredicted RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 SLC27A6Q9Y2P4 619 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 TMEM200CA6NKL6 621 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 RPP40O75818 363 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 NME1P15531 152 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 MMP12P39900 470 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 RPS25P62851 125 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 GRB14Q14449 540 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 EIF4HQ15056 248 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 C1orf189Q5VU69 101 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 QSOX2Q6ZRP7 698 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 ZNF551Q7Z340 670 aaPredicted RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 CEACAM19Q7Z692 300 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 PXT1Q8NFP0 134 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 HMGCLL1Q8TB92 370 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 NT5C3BQ969T7 300 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 RAD51AP1Q96B01 352 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 CIPCQ9C0C6 399 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 ENTPD4Q9Y227 616 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 SULT1C2O00338 296 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 SLC25A14O95258 325 aaPredicted RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 SLC25A27O95847 323 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 BCKDHAP12694 445 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 BMP7P18075 431 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 S100A11P31949 105 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 TAS2R41P59536 307 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 ALKBH1Q13686 389 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 EIF2S3LQ2VIR3 472 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 SFRP5Q5T4F7 317 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 TAPT1Q6NXT6 567 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 GOLGA7Q7Z5G4 137 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 WDR20Q8TBZ3 569 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 UPRTQ96BW1 309 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 C12orf42Q96LP6 360 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 UROC1Q96N76 676 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 SEMA4CQ9C0C4 833 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 IMP3Q9NV31 184 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 GPRC5BQ9NZH0 403 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 EXO1Q9UQ84 846 aaKnown RBP13.09□□□□□ -0.31
RUNX3-203ENST00000399916 RASD1Q9Y272 281 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 PCDHB7Q9Y5E2 793 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 NUBP2Q9Y5Y2 271 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
RUNX3-203ENST00000399916 TCRBV5S2A0A599 114 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 FAM74A7A6NL05 159 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 FAM227AF5H4B4 570 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 FFAR2O15552 330 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 CYTIPO60759 359 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 SLC19A2O60779 497 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 SNAPINO95295 136 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 MRPL3P09001 348 aaKnown RBP13.08□□□□□ -0.32
RUNX3-203ENST00000399916 TTPAP49638 278 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 ERVPABLB-1P60509 514 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 SOX4Q06945 474 aaPredicted RBP13.08□□□□□ -0.32
RUNX3-203ENST00000399916 RNF151Q2KHN1 245 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 ALG11Q2TAA5 492 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 FAM74A3Q4VXF1 159 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 KCTD11Q693B1 232 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 NUDT18Q6ZVK8 323 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 TIPARPQ7Z3E1 657 aaKnown RBP13.08□□□□□ -0.32
RUNX3-203ENST00000399916 NAXEQ8NCW5 288 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 DBF4BQ8NFT6 615 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 FNIP2Q9P278 1114 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 FARSAQ9Y285 508 aaKnown RBP13.08□□□□□ -0.32
RUNX3-203ENST00000399916 TVP23AA6NH52 213 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 MANSC4A6NHS7 340 aaPredicted RBP13.08□□□□□ -0.32
RUNX3-203ENST00000399916 DGKAP23743 735 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 MAGEA11P43364 429 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 UBE2IP63279 158 aaKnown RBP13.08□□□□□ -0.32
RUNX3-203ENST00000399916 NFKB2Q00653 900 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 MSANTD1Q6ZTZ1 278 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 CLDN19Q8N6F1 224 aa13.08□□□□□ -0.32
RUNX3-203ENST00000399916 ZNF548Q8NEK5 533 aaPredicted RBP13.08□□□□□ -0.32
RUNX3-203ENST00000399916 SCAMP5Q8TAC9 235 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms