RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 BBS10Q8TAM1 723 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 CTRCQ99895 268 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 POLE4Q9NR33 117 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TM7SF3Q9NS93 570 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 CDH22Q9UJ99 828 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 KCND3Q9UK17 655 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 PLIN4Q96Q06 1357 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 A0A1B0GVC2 190 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TOR1AO14656 332 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 ALDOBP05062 364 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 RHCEP18577 417 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 ELAVL3Q14576 367 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 PON3Q15166 354 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 HOXB13Q92826 284 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM173AQ9BQD7 235 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 EDEM2Q9BV94 578 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 RICTORQ6R327 1708 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TOPAZ1Q8N9V7 1692 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 SIGLEC6O43699 453 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 MPZL2O60487 215 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 SHC2P98077 582 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 PITPNAQ00169 270 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 EVX2Q03828 476 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 SOWAHAQ2M3V2 549 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 LRIT3Q3SXY7 679 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM174BQ3ZCQ3 159 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 OR4N5Q8IXE1 308 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 FANK1Q8TC84 345 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 TMEM203Q969S6 136 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 HS6ST2Q96MM7 605 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 OR6C1Q96RD1 312 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 CD180Q99467 661 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 C12orf65Q9H3J6 166 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 NKX1-2Q9UD57 310 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 FZD4Q9ULV1 537 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 PCDHGA10Q9Y5H3 936 aa10.48□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF850A8MQ14 1090 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM189A1O60320 539 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 ECI2O75521 394 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 CTSAP10619 480 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF81P51508 661 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 MLLT10P55197 1068 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 FGL1Q08830 312 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 LYPD8Q6UX82 237 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 Q6ZVL8 140 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 OR2T34Q8NGX1 318 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 ELF4Q99607 663 aaPredicted RBP10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 NDUFAF4Q9P032 175 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 NUMBLQ9Y6R0 609 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 SETD1AO15047 1707 aaKnown RBP10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 A0A1W2PQ09 198 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 LCATP04180 440 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 WDR5P61964 334 aaKnown RBP10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 FIGNL1Q6PIW4 674 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 AHSA2Q719I0 299 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 SLC46A3Q7Z3Q1 461 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 ZNF566Q969W8 418 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 OR2S2Q9NQN1 319 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 I3L521 148 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM155BO75949 473 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 OPN1LWP04000 364 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 GSTM2P28161 218 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 FCER1GP30273 86 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 ALDH3B1P43353 468 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 PHC1P78364 1004 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 CFAP77Q6ZQR2 320 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 TRAM1L1Q8N609 369 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 TMEM178AQ8NBL3 297 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 DMAC2Q9NW81 257 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 KLHL42Q9P2K6 505 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 FAM96BQ9Y3D0 163 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 RAB27BO00194 218 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 KIR2DL3P43628 341 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 TMBIM6P55061 237 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 DEFB103AP81534 67 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 NTRK2Q16620 822 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 KLHL22Q53GT1 634 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 OR52W1Q6IF63 320 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 BTLAQ7Z6A9 289 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 PGAM4Q8N0Y7 254 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 OR6C4Q8NGE1 309 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 MYRFLQ96LU7 910 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 FGFBP2Q9BYJ0 223 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 THSD1Q9NS62 852 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 POT1Q9NUX5 634 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 SNHG28P0DPA3 235 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 DLSTP36957 453 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 CX3CR1P49238 355 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 C19orf35Q6ZS72 473 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 NXPE3Q969Y0 559 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 HCAR1Q9BXC0 346 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 VDAC3Q9Y277 283 aa10.47□□□□□ -0.73
CACNA1C-216ENST00000399638 SAGE2PA6NJ88 616 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 DVL1O14640 695 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 ACPPP15309 386 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 EPHA5P54756 1037 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 DVL1P1P54792 670 aaPredicted RBP10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 NATD1Q8N6N6 113 aa10.46□□□□□ -0.73
CACNA1C-216ENST00000399638 MALSU1Q96EH3 234 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms