RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 NNATQ16517 81 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF628Q5EBL2 1059 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 XKR7Q5GH72 579 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 HLA-DQA1Q5Y7H0 255 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ANKRD26P1Q6NSI1 321 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 RTL4Q6ZR62 310 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FAM13CQ8NE31 585 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR52R1Q8NGF1 315 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR5M3Q8NGP4 307 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MGARPQ8TDB4 240 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TLCD1Q96CP7 247 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SPACA9Q96E40 222 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PPP1R36Q96LQ0 422 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TSSK3Q96PN8 268 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 BBS4Q96RK4 519 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 STMN4Q9H169 189 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GIMAP4Q9NUV9 329 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SEC14L3Q9UDX4 400 aa13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ERRFI1Q9UJM3 462 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ASH1LQ9NR48 2969 aaKnown RBP13□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MYO1GB0I1T2 1018 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 AKAP10O43572 662 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 RNF224P0DH78 156 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF24P17028 368 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GPX3P22352 226 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MPIP34949 423 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SLC1A6P48664 564 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 EMDP50402 254 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 HHATQ5VTY9 493 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SIAH3Q8IW03 269 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PRR22Q8IZ63 422 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SAMD14Q8IZD0 417 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SLC15A4Q8N697 577 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GOLM1Q8NBJ4 401 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR10G3Q8NGC4 313 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF675Q8TD23 568 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SGCZQ96LD1 299 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SORT1Q99523 831 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CCT7Q99832 543 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ITPAQ9BY32 194 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NXF5Q9H1B4 397 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TAS2R7Q9NYW3 318 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 WBP11Q9Y2W2 641 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 DOPEY2Q9Y3R5 2298 aa12.99□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TMEM114B3SHH9 223 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 HS6ST1O60243 411 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FBXO45P0C2W1 286 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 BCKDHAP12694 445 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PIGAP37287 484 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 DNASE1L1P49184 302 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NCBP2P52298 156 aaKnown RBP eCLIP12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 HSF1Q00613 529 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FAM47EQ6ZV65 393 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 IKBIPQ70UQ0 350 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TAGAPQ8N103 731 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZFP62Q8NB50 900 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR2M7Q8NG81 312 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 OR7G2Q8NG99 324 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TP53INP1Q96A56 240 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ARL8AQ96BM9 186 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GPR137Q96N19 417 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 C1orf50Q9BV19 199 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GLIPR2Q9H4G4 154 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SH2D2AQ9NP31 389 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SACM1LQ9NTJ5 587 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TMED5Q9Y3A6 229 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NPFFR2Q9Y5X5 522 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CHCHD2Q9Y6H1 151 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 HECTD1Q9ULT8 2610 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 EML6Q6ZMW3 1958 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 UTP20O75691 2785 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ASNA1O43681 348 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 P04436 131 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CNR1P21554 472 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 GRK2P25098 689 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FBXW4P57775 412 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 BST1Q10588 318 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 STX3Q13277 289 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PDCD2Q16342 344 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NTRK2Q16620 822 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ATP6AP1LQ52LC2 224 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ZNF385BQ569K4 471 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 C6orf136Q5SQH8 315 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 SLC22A10Q63ZE4 541 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FAM9CQ8IZT9 166 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PAQR8Q8TEZ7 354 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 CIDECQ96AQ7 238 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PPP3R2Q96LZ3 170 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 RAP2CQ9Y3L5 183 aa12.98□□□□□ -0.33
HLA-DQB1-202ENST00000399079 FAM166BA8MTA8 275 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 TFECO14948 347 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 LRRTM2O43300 516 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 ABCD3P28288 659 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NTSP30990 170 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 MC3RP41968 323 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 RPL14P50914 215 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 NRG3P56975 720 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 PTGR1Q14914 329 aa12.97□□□□□ -0.33
HLA-DQB1-202ENST00000399079 KRTCAP3Q53RY4 240 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms