RNA–Protein interactions for RNA: ENST00000398225.7

PDE9A-208, Transcript of phosphodiesterase 9A, human

TSL 1 (best) BASIC

Gene PDE9A, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-208	ENST00000398225	SEC24D	O94855	1032 aa	Predicted RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	PRPS1L1	P21108	318 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	GPX3	P22352	226 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	HPCAL1	P37235	193 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	OR4D2	P58180	307 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	HPCA	P84074	193 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	ATP1A4	Q13733	1029 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	PDE7A	Q13946	482 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	FAM210A	Q96ND0	272 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	EHD3	Q9NZN3	535 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	CCDC167	Q9P0B6	97 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	PSME2	Q9UL46	239 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	WBP11	Q9Y2W2	641 aa	Known RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	ZNF780B	Q9Y6R6	833 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	ACACB	O00763	2458 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	MAP1B	P46821	2468 aa	Known RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	BLACE	A4D250	179 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	SLC22A3	O75751	556 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	MSX2	P35548	267 aa	Predicted RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	ZFP36L2	P47974	494 aa	Known RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	DGKQ	P52824	942 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	IGLV3-21	P80748	117 aa	Predicted RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	GK3P	Q14409	553 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	LTB4R	Q15722	352 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	PDCD4	Q53EL6	469 aa	Known RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	SPANXN4	Q5MJ08	99 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	CCDC81	Q6ZN84	652 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	LRRC69	Q6ZNQ3	347 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	MRGPRE	Q86SM8	312 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	MIER2	Q8N344	545 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	OR11G2	Q8NGC1	345 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	WDR77	Q9BQA1	342 aa	Predicted RBP	13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	CLMP	Q9H6B4	373 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	P4HTM	Q9NXG6	502 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	ATP6V1H	Q9UI12	483 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	GMEB1	Q9Y692	573 aa		13.72	□□□□□ -0.21
PDE9A-208	ENST00000398225	PTPRQ	Q9UMZ3	2332 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	SPEN	Q96T58	3664 aa	Known RBP	13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	HRK	O00198	91 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	CPM	P14384	443 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	POR	P16435	677 aa	Predicted RBP	13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	STX1B	P61266	288 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	PHC1	P78364	1004 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	FAM174B	Q3ZCQ3	159 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	CPTP	Q5TA50	214 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	OR4F3	Q6IEY1	312 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	FUNDC1	Q8IVP5	155 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	SUN3	Q8TAQ9	357 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	RBM18	Q96H35	190 aa	Known RBP	13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	DGAT2	Q96PD7	388 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	BBS4	Q96RK4	519 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	ANKRA2	Q9H9E1	313 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	TAS2R7	Q9NYW3	318 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	ENTPD4	Q9Y227	616 aa		13.71	□□□□□ -0.21
PDE9A-208	ENST00000398225	IGHV1-45	A0A0A0MS14	117 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	HNRNPR	O43390	633 aa	Known RBP	13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	OR10H2	O60403	315 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	CELA2A	P08217	269 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	CT62	P0C5K7	136 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	COX6A1	P12074	109 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	PGD	P52209	483 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	SERTAD2	Q14140	314 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	PCOLCE	Q15113	449 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	PAPD4	Q6PIY7	484 aa	Known RBP	13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	ISLR2	Q6UXK2	745 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	ZNF551	Q7Z340	670 aa	Predicted RBP	13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	LRRC25	Q8N386	305 aa	Predicted RBP	13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	SIMC1	Q8NDZ2	872 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	MTERF3	Q96E29	417 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	FAM117A	Q9C073	453 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	GLIPR2	Q9H4G4	154 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	GALNT8	Q9NY28	637 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	CEPT1	Q9Y6K0	416 aa		13.71	□□□□□ -0.22
PDE9A-208	ENST00000398225	LOC102723996	A0A087X1L8	192 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	ZNF891	A8MT65	544 aa	Predicted RBP	13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	C17orf105	B2RV13	164 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	PDPK1	O15530	556 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	IGHE	P01854	428 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	C8B	P07358	591 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	SLC35E2	P0CK97	266 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	ZNF26	P17031	533 aa	Predicted RBP	13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	TNNI3	P19429	210 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	NT5E	P21589	574 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	SOX18	P35713	384 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	STT3A	P46977	705 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	NCBP2	P52298	156 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	C21orf58	P58505	322 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	PSME3	P61289	254 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	TXNL4A	P83876	142 aa	Known RBP	13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	PLIN5	Q00G26	463 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	CDC20	Q12834	499 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	CHAF1B	Q13112	559 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	AGK	Q53H12	422 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	FAM111B	Q6SJ93	734 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	ANKRD46	Q86W74	232 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	RAB43	Q86YS6	212 aa		13.7	□□□□□ -0.22
PDE9A-208	ENST00000398225	CHERP	Q8IWX8	916 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms