RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 RFC3P40938 356 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 EMDP50402 254 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 MRPS35P82673 323 aaKnown RBP15.39■□□□□ 0.05
APTR-201ENST00000398043 C2orf80Q0P641 193 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 NTRK2Q16620 822 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 RFTN2Q52LD8 501 aaPredicted RBP15.39■□□□□ 0.05
APTR-201ENST00000398043 XKR7Q5GH72 579 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 BNC2Q6ZN30 1099 aaPredicted RBP15.39■□□□□ 0.05
APTR-201ENST00000398043 Q6ZPB1 254 aaPredicted RBP15.39■□□□□ 0.05
APTR-201ENST00000398043 IKBIPQ70UQ0 350 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 CROCCP2Q86T23 111 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 DND1Q8IYX4 353 aaKnown RBP15.39■□□□□ 0.05
APTR-201ENST00000398043 SAMD14Q8IZD0 417 aaPredicted RBP15.39■□□□□ 0.05
APTR-201ENST00000398043 TWIST2Q8WVJ9 160 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 ZBTB9Q96C00 473 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 ERP27Q96DN0 273 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 PKNOX2Q96KN3 472 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 BRINP2Q9C0B6 783 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 LRTM1Q9HBL6 345 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 EML4Q9HC35 981 aaKnown RBP15.39■□□□□ 0.05
APTR-201ENST00000398043 ZDHHC2Q9UIJ5 367 aa15.39■□□□□ 0.05
APTR-201ENST00000398043 CNOT11Q9UKZ1 510 aaKnown RBP15.39■□□□□ 0.05
APTR-201ENST00000398043 MED12Q93074 2177 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 PIP5K1BO14986 540 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 BIRC5O15392 142 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 LRRTM2O43300 516 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 ITM2AO43736 263 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 NR0B1P51843 470 aaKnown RBP15.38■□□□□ 0.05
APTR-201ENST00000398043 HYAL4Q2M3T9 481 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.38■□□□□ 0.05
APTR-201ENST00000398043 CMPK2Q5EBM0 449 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 SH2D4BQ5SQS7 431 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 TMEM64Q6YI46 380 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 TICAM1Q8IUC6 712 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 NUDCD3Q8IVD9 361 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 OR10G3Q8NGC4 313 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 OR9A2Q8NGT5 310 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 ZNF764Q96H86 408 aaPredicted RBP15.38■□□□□ 0.05
APTR-201ENST00000398043 C3orf30Q96M34 536 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 CCT7Q99832 543 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 FAM173AQ9BQD7 235 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 C20orf27Q9GZN8 174 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 NXF5Q9H1B4 397 aaKnown RBP15.38■□□□□ 0.05
APTR-201ENST00000398043 ANKRA2Q9H9E1 313 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 SACM1LQ9NTJ5 587 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 NPFFR2Q9Y5X5 522 aa15.38■□□□□ 0.05
APTR-201ENST00000398043 G3V3Y1 287 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 HS6ST1O60243 411 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 PLOD3O60568 738 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 SLC19A2O60779 497 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 CHEK2O96017 543 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 SDC1P18827 310 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 CA7P43166 264 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 HSF1Q00613 529 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 C6orf163Q5TEZ5 329 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 C1QL3Q5VWW1 255 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 SLC22A10Q63ZE4 541 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 GHDCQ8N2G8 530 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 FBXW8Q8N3Y1 598 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 OR7G2Q8NG99 324 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 OR52R1Q8NGF1 315 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 OR52N2Q8NGI0 321 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 KAT2AQ92830 837 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 ITPAQ9BY32 194 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 TTTY12Q9BZ98 90 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 ZNF395Q9H8N7 513 aaPredicted RBP15.37■□□□□ 0.05
APTR-201ENST00000398043 ZDHHC11Q9H8X9 412 aa15.37■□□□□ 0.05
APTR-201ENST00000398043 A0A1B0GUH1 482 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 ANKRD33BA6NCL7 494 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 TFECO14948 347 aaPredicted RBP15.36■□□□□ 0.05
APTR-201ENST00000398043 TO15178 435 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 ZNHIT1O43257 154 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 TBX19O60806 448 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 ERLIN1O75477 346 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 LYPLA1O75608 230 aaPredicted RBP15.36■□□□□ 0.05
APTR-201ENST00000398043 ZWINTO95229 277 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 P04436 131 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 SERPINE1P05121 402 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 DRD5P21918 477 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 ABCD3P28288 659 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 MPIP34949 423 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 PIGAP37287 484 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 DNASE1L1P49184 302 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 PDE7AQ13946 482 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 GK5Q6ZS86 529 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 SPPL2CQ8IUH8 684 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 TAGAPQ8N103 731 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 AGR3Q8TD06 166 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 SORT1Q99523 831 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 CENPHQ9H3R5 247 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 IL1RL2Q9HB29 575 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 TUBA8Q9NY65 449 aaPredicted RBP15.36■□□□□ 0.05
APTR-201ENST00000398043 CNIH4Q9P003 139 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 GIMAP2Q9UG22 337 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 BCAP29Q9UHQ4 241 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 HAO1Q9UJM8 370 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 ENTPD4Q9Y227 616 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 CFL2Q9Y281 166 aa15.36■□□□□ 0.05
APTR-201ENST00000398043 GPR55Q9Y2T6 319 aaPredicted RBP15.36■□□□□ 0.05
APTR-201ENST00000398043 TMED5Q9Y3A6 229 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms