RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TRBV11-1A0A0K0K1C0 115 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 TLE3Q04726 772 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 WDR53Q7Z5U6 358 aaPredicted RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 LMO3Q8TAP4 145 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 RAB2BQ8WUD1 216 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 SLC25A44Q96H78 314 aaPredicted RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 ZNF442Q9H7R0 627 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 ZNF850A8MQ14 1090 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 XPNPEP2O43895 674 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 CHRNEQ04844 493 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 BLMHQ13867 455 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 HNRNPA1L2Q32P51 320 aaKnown RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 OR4K13Q8NH42 304 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 SLC6A17Q9H1V8 727 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 RNF215Q9Y6U7 377 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 CD8B2A6NJW9 211 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 AURKAO14965 403 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 LILRB3O75022 631 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 CD8BP10966 210 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 MAGEA12P43365 314 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 RIDAP52758 137 aaKnown RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 KCTD18Q6PI47 426 aaPredicted RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 GID4Q8IVV7 300 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 FAM171A2A8MVW0 826 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 POU3F2P20265 443 aaPredicted RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 C16orf78Q8WTQ4 265 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 NANOS1Q8WY41 292 aaKnown RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 DCSTAMPQ9H295 470 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 KIF13AQ9H1H9 1805 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 SCN11AQ9UI33 1791 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 NPIPA5A0A0B4J1W7 369 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 KANTRA0A1W2PQU2 76 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 DPPA5A6NC42 116 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 NPIPA7E9PJI5 369 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 DCNP07585 359 aaKnown RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 NPIPA8P0DM63 369 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 SUOXP51687 545 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 TANGO2Q6ICL3 276 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 PARS2Q7L3T8 475 aaKnown RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 LHFPL3Q86UP9 236 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 DMWDQ09019 674 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 UGT3A2Q3SY77 523 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 BCL2L15Q5TBC7 163 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 UNC5DQ6UXZ4 953 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 ZNF551Q7Z340 670 aaPredicted RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 CNIH3Q8TBE1 160 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 RNF38Q9H0F5 515 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 SFTPBP07988 381 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 SLC35E2BP0CK96 405 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 LRRC37A5PQ49AS3 106 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 RANBP9Q96S59 729 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 APLNRP35414 380 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 EEF1A1P68104 462 aaKnown RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 PIGWQ7Z7B1 504 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 HOXB13Q92826 284 aaPredicted RBP10.8□□□□□ -0.68
TTC28-201ENST00000397906 SGTBQ96EQ0 304 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 DOHHQ9BU89 302 aa10.8□□□□□ -0.68
TTC28-201ENST00000397906 ALDOAP04075 364 aaKnown RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 CD3GP09693 182 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 EMP2P54851 167 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 MANEAQ5SRI9 462 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 BORCS6Q96GS4 357 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 ADAM12O43184 909 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 HLA-DPB1P04440 258 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 CD83Q01151 205 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 HNRNPA0Q13151 305 aaKnown RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 TMEM201Q5SNT2 666 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 COMMD6Q7Z4G1 85 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 CPNE7Q9UBL6 633 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 SPO11Q9Y5K1 396 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 MEN1O00255 615 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 MPPED1O15442 326 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 PSMB5P28074 263 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 GALNT1Q10472 559 aaPredicted RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 ATXN7L3Q14CW9 347 aaPredicted RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 UNC50Q53HI1 259 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 GPR26Q8NDV2 337 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 TMEM68Q96MH6 324 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 ABLIM1O14639 778 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 CELP19835 753 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 RSU1Q15404 277 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 SEC23BQ15437 767 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 NR4A3Q92570 626 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 HINT2Q9BX68 163 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 FAM155AB1AL88 458 aaPredicted RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 FLRT2O43155 660 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 ITIH1P19827 911 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 AFF1P51825 1210 aaKnown RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 ARSKQ6UWY0 536 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 TCEAL3Q969E4 200 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 RETREG1Q9H6L5 497 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 IL26Q9NPH9 171 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 IGKV6D-21A0A0A0MT36 114 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 CBFA2T3O75081 653 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 BCAS2O75934 225 aaPredicted RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 ZP2Q05996 745 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 MPP2Q14168 576 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 PNCKQ6P2M8 343 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 SCD5Q86SK9 330 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms