RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 TMEM8BA6NDV4 472 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 TAF4O00268 1085 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 BCAS2O75934 225 aaPredicted RBP18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 UBOX5O94941 541 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 PRKAR1AP10644 381 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CCT3P49368 545 aaKnown RBP18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 SLC37A1P57057 533 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 PRR5P85299 388 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 TLE3Q04726 772 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 NFYCQ13952 458 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 TRMT5Q32P41 509 aaKnown RBP18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 SPDYE7PQ495Y7 208 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CLEC4FQ8N1N0 589 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 NUP43Q8NFH3 380 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 OR56A1Q8NGH5 318 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 OR5AK3PQ8NH89 298 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 M1APQ8TC57 530 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ZCCHC14Q8WYQ9 949 aaKnown RBP18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 GIMAP5Q96F15 307 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 MAGED4Q96JG8 741 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 SLC35A5Q9BS91 424 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 OR10A5Q9H207 317 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 EPS8L2Q9H6S3 715 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 C3orf14Q9HBI5 128 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 MMP25Q9NPA2 562 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ZCCHC3Q9NUD5 404 aaKnown RBP18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 SLC25A37Q9NYZ2 338 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 COPS7AQ9UBW8 275 aa18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ZNF223Q9UK11 482 aaPredicted RBP18.11■□□□□ 0.49
MAP1LC3A-203ENST00000397709 FXYD1O00168 92 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 AIM2O14862 343 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 PRAMEF2O60811 474 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 COQ9O75208 318 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ANP32DO95626 131 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 NPPAP01160 153 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 T-ENOLP0DO92 83 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CALB2P22676 271 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CPA2P48052 419 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 BTBD16Q32M84 506 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 DCAF10Q5QP82 559 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 SAXO2Q658L1 398 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 HACD2Q6Y1H2 254 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 RNF111Q6ZNA4 994 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ELP5Q8TE02 316 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ZFP90Q8TF47 636 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 NEURL3Q96EH8 262 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 MS4A4EQ96PG1 132 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 EFCAB1Q9HAE3 211 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 VAPAQ9P0L0 249 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 BCAP29Q9UHQ4 241 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CELSR3Q9NYQ7 3312 aa18.1■□□□□ 0.49
MAP1LC3A-203ENST00000397709 IGF2RP11717 2491 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 OR6C76A6NM76 312 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 MASP2O00187 686 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CELA2AP08217 269 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ESRRAP11474 423 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ICAM2P13598 275 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 EMDP50402 254 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CLCN2P51788 898 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 Q0VFX4 171 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 BROXQ5VW32 411 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CCDC81Q6ZN84 652 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 LRRC69Q6ZNQ3 347 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 C6orf120Q7Z4R8 191 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 C9orf40Q8IXQ3 194 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ZSCAN1Q8NBB4 408 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 C16orf52Q8NHV5 167 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 ROPN1LQ96C74 230 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 LRRC58Q96CX6 371 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 FER1L6-AS2Q96M78 137 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 CGREF1Q99674 301 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 IL1RL2Q9HB29 575 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 GPATCH2Q9NW75 528 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 GID8Q9NWU2 228 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 PRODH2Q9UF12 536 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 POLHQ9Y253 713 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 HEMK1Q9Y5R4 338 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 GMEB1Q9Y692 573 aa18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 URB1O60287 2271 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3A-203ENST00000397709 A0A087WV48 116 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 C1QCP02747 245 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 NUDT2P50583 147 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 PRKAG1P54619 331 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 TP53BP2Q13625 1128 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 RUNDC3AQ59EK9 446 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 EXOSC6Q5RKV6 272 aaKnown RBP18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 BHLHB9Q6PI77 547 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 SZRD1Q7Z422 152 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 KIF2BQ8N4N8 673 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 KDF1Q8NAX2 398 aaPredicted RBP18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 OR8K3Q8NH51 312 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 HOXB13Q92826 284 aaPredicted RBP18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 AURKBQ96GD4 344 aaPredicted RBP18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 VSTM2LQ96N03 204 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 TPT1P8Q9HAU6 139 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 FOLH1BQ9HBA9 442 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 CFL2Q9Y281 166 aa18.08■□□□□ 0.48
MAP1LC3A-203ENST00000397709 TRBV11-1A0A0K0K1C0 115 aa18.07■□□□□ 0.48
MAP1LC3A-203ENST00000397709 NME6O75414 186 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms