RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 VEZF1Q14119 521 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 MRPL14Q6P1L8 145 aaKnown RBP25.68■■□□□ 1.7
CPNE1-203ENST00000397442 SHISA6Q6ZSJ9 500 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 SPATA24Q86W54 205 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 C11orf65Q8NCR3 313 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 OR5D16Q8NGK9 328 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 RAB8BQ92930 207 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 FKBP10Q96AY3 582 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 LRGUKQ96M69 825 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 PELOQ9BRX2 385 aaKnown RBP25.68■■□□□ 1.7
CPNE1-203ENST00000397442 YIPF4Q9BSR8 244 aa25.68■■□□□ 1.7
CPNE1-203ENST00000397442 WDFY3Q8IZQ1 3526 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 AQP12BA6NM10 295 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 HRKO00198 91 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 STAMBPO95630 424 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 ATP6V1G2O95670 118 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 ALBP02768 609 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 ARAFP10398 606 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 PCGF2P35227 344 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 POLE2P56282 527 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 MRPS22P82650 360 aaKnown RBP25.67■■□□□ 1.7
CPNE1-203ENST00000397442 RHDQ02161 417 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 RBBP4Q09028 425 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 DUSP8Q13202 625 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 EXOSC7Q15024 291 aaKnown RBP25.67■■□□□ 1.7
CPNE1-203ENST00000397442 MFSD12Q6NUT3 480 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 AQP12AQ8IXF9 295 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 EQTNQ9NQ60 294 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 PCDHGA3Q9Y5H0 932 aa25.67■■□□□ 1.7
CPNE1-203ENST00000397442 C9orf172C9J069 976 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 CREG1O75629 220 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 IFNA16P05015 189 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 KLK3P07288 261 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-203ENST00000397442 CEACAM1P13688 526 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 PRIM2P49643 509 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 NSDHLQ15738 373 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 MAPK11Q15759 364 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 FAM199XQ6PEV8 388 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-203ENST00000397442 GALNT6Q8NCL4 622 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 WDR36Q8NI36 951 aaKnown RBP25.66■■□□□ 1.7
CPNE1-203ENST00000397442 PTPMT1Q8WUK0 201 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-203ENST00000397442 PYDC1Q8WXC3 89 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 NSMCE2Q96MF7 247 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 SPSB2Q99619 263 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 SPRY4Q9C004 299 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 TRIM15Q9C019 465 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 A4GALTQ9NPC4 353 aa25.66■■□□□ 1.7
CPNE1-203ENST00000397442 STK17BO94768 372 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 OR12D1P0DN82 309 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 KHKP50053 298 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 EXOSC6Q5RKV6 272 aaKnown RBP25.65■■□□□ 1.7
CPNE1-203ENST00000397442 FAM198BQ6UWH4 519 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 LGI4Q8N135 537 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 CACTIN-AS1Q8N1I8 211 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 OR52E4Q8NGH9 312 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 STMN2Q93045 179 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 OTUB1Q96FW1 271 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-203ENST00000397442 ACTRT3Q9BYD9 372 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 SOX17Q9H6I2 414 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-203ENST00000397442 ADAP2Q9NPF8 381 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 SATB2Q9UPW6 733 aa25.65■■□□□ 1.7
CPNE1-203ENST00000397442 PRAMEF27A3QJZ7 478 aa25.64■■□□□ 1.7
CPNE1-203ENST00000397442 GCM2O75603 506 aaPredicted RBP25.64■■□□□ 1.7
CPNE1-203ENST00000397442 TFPTP0C1Z6 253 aa25.64■■□□□ 1.7
CPNE1-203ENST00000397442 FUT7Q11130 342 aa25.64■■□□□ 1.7
CPNE1-203ENST00000397442 TARDBPQ13148 414 aaKnown RBP eCLIP25.64■■□□□ 1.7
CPNE1-203ENST00000397442 ZNF630Q2M218 657 aaPredicted RBP25.64■■□□□ 1.7
CPNE1-203ENST00000397442 C3orf38Q5JPI3 329 aa25.64■■□□□ 1.7
CPNE1-203ENST00000397442 MLIPQ5VWP3 458 aa25.64■■□□□ 1.7
CPNE1-203ENST00000397442 WDR53Q7Z5U6 358 aaPredicted RBP25.64■■□□□ 1.7
CPNE1-203ENST00000397442 NFKBIDQ8NI38 313 aa25.64■■□□□ 1.7
CPNE1-203ENST00000397442 FBXO30Q8TB52 745 aa25.64■■□□□ 1.7
CPNE1-203ENST00000397442 MR1Q95460 341 aa25.64■■□□□ 1.7
CPNE1-203ENST00000397442 PNO1Q9NRX1 252 aaKnown RBP25.64■■□□□ 1.7
CPNE1-203ENST00000397442 IDSB3KWA1 339 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 SSTR4P31391 388 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 CDK6Q00534 326 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 SCARB2Q14108 478 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 ZNF267Q14586 743 aaPredicted RBP25.64■■□□□ 1.69
CPNE1-203ENST00000397442 MYBPC3Q14896 1274 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 C7orf57Q8NEG2 295 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 SLC38A5Q8WUX1 472 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 NCLNQ969V3 563 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 OR7D2Q96RA2 312 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 S100A14Q9HCY8 104 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 THUMPD1Q9NXG2 353 aaKnown RBP25.64■■□□□ 1.69
CPNE1-203ENST00000397442 KCNE3Q9Y6H6 103 aa25.64■■□□□ 1.69
CPNE1-203ENST00000397442 C17orf105B2RV13 164 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 H3BNX3 289 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 FKBP6O75344 327 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 GMNNO75496 209 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 DLGAP3O95886 979 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 CRYBA2P53672 197 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 CDC73Q6P1J9 531 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 AAGABQ6PD74 315 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 LANCL3Q6ZV70 420 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 C10orf67Q8IYJ2 551 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 SLC16A11Q8NCK7 471 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 OR52R1Q8NGF1 315 aa25.63■■□□□ 1.69
CPNE1-203ENST00000397442 XAGE5Q8WWM1 108 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms