RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CHI3L1P36222 383 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 GSK3BP49841 420 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 FOXL2P58012 376 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 MRPS35P82673 323 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 LIPEQ05469 1076 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 FHL5Q5TD97 284 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 TMEM164Q5U3C3 297 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 MLIPQ5VWP3 458 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 FAM111BQ6SJ93 734 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 SHISA6Q6ZSJ9 500 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 TIPARPQ7Z3E1 657 aaKnown RBP15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 CALHM3Q86XJ0 350 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 FAM156AQ8NDB6 213 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 OR7G2Q8NG99 324 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 OR52N2Q8NGI0 321 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 TTC9Q92623 222 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 MR1Q95460 341 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 MOAP1Q96BY2 351 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 CTHRC1Q96CG8 243 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 DGAT2Q96PD7 388 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 SPSB2Q99619 263 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 ALG2Q9H553 416 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 WDR54Q9H977 334 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 CORO2BQ9UQ03 480 aa15.82■□□□□ 0.12
TSPAN4-205ENST00000397406 A0A087WV62 115 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 K7ENP7 123 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 UPK1AO00322 258 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 EMC8O43402 210 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 DNAJA2O60884 412 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 KRT75O95678 551 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 WT1P19544 449 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 ME2P23368 584 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 TMPRSS3P57727 454 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 CORO7P57737 925 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 VAC14Q08AM6 782 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 MAP4K2Q12851 820 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 RGNQ15493 299 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 SPDYE7PQ495Y7 208 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 TRMT12Q53H54 448 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 COX20Q5RI15 118 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 INO80CQ6PI98 192 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 C6orf15Q6UXA7 325 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 C6orf120Q7Z4R8 191 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 OR2L13Q8N349 312 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 C7orf57Q8NEG2 295 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 OR10A6Q8NH74 314 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 SLC39A7Q92504 469 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 ECSITQ9BQ95 431 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 PELOQ9BRX2 385 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 SEMA4CQ9C0C4 833 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 SOX17Q9H6I2 414 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 ANKRA2Q9H9E1 313 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 CXorf21Q9HAI6 301 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 C3orf14Q9HBI5 128 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 ZCCHC3Q9NUD5 404 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 PTGFRNQ9P2B2 879 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 ZNF639Q9UID6 485 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 USP22Q9UPT9 525 aa15.81■□□□□ 0.12
TSPAN4-205ENST00000397406 IDSB3KWA1 339 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 PLOD3O60568 738 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 TCN1P20061 433 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 MSX2P35548 267 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 TP53BP2Q13625 1128 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.8■□□□□ 0.125e-6■■■■□ 22.8
TSPAN4-205ENST00000397406 NET1Q7Z628 596 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 SERPINA11Q86U17 422 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 RNF130Q86XS8 419 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 DTX1Q86Y01 620 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 SIMC1Q8NDZ2 872 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 FAM13CQ8NE31 585 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 NUP43Q8NFH3 380 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 OR56A1Q8NGH5 318 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 DOK4Q8TEW6 326 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 CCDC124Q96CT7 223 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 RBM18Q96H35 190 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 MAGED4Q96JG8 741 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 RAD21L1Q9H4I0 556 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 SERHL2Q9H4I8 314 aa15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 SUCOQ9UBS9 1254 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 GPN3Q9UHW5 284 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 C19orf53Q9UNZ5 99 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 RRP15Q9Y3B9 282 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 FASNP49327 2511 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-205ENST00000397406 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 SYNDIG1LA6NDD5 238 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 FAM220BPB1ANY3 271 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 C9J4A7 227 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 PSMG1O95456 288 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 HEXBP07686 556 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 CYC1P08574 325 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 S1PR1P21453 382 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 HTR1EP28566 365 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 CASP9P55211 416 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 OR4D2P58180 307 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 PRR5P85299 388 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 FADDQ13158 208 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 MAP7Q14244 749 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 NCF4Q15080 339 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 NSDHLQ15738 373 aa15.79■□□□□ 0.12
TSPAN4-205ENST00000397406 FXNQ16595 210 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms