RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TLX1P31314 330 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 SSR2P43308 183 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 NRG3P56975 720 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 PCDH1Q08174 1060 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 SLAMF1Q13291 335 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 CYP1B1Q16678 543 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 HIST2H2ACQ16777 129 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 TMEM249Q2WGJ8 235 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 FAM174BQ3ZCQ3 159 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 DEPDC1Q5TB30 811 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 HIST2H2AA3Q6FI13 130 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 OR4C11Q6IEV9 310 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 TMEM64Q6YI46 380 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 ZNF704Q6ZNC4 412 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 YRDCQ86U90 279 aaKnown RBP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 GPR180Q86V85 440 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 GCNT2Q8N0V5 402 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 ARIH2OSQ8N7S6 290 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 C17orf47Q8NEP4 570 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 OR1J4Q8NGS1 313 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 RIT1Q92963 219 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 GTPBP3Q969Y2 492 aaKnown RBP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 ADIPOR1Q96A54 375 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 KRT12Q99456 494 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 G6PC3Q9BUM1 346 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 PLAC1Q9HBJ0 212 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 PPANQ9NQ55 473 aaKnown RBP8.53□□□□□ -1.04
NEDD9-203ENST00000397378 ZNF281Q9Y2X9 895 aa8.53□□□□□ -1.04
NEDD9-203ENST00000397378 A0A1W2PNV4 684 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 NCF1BA6NI72 391 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 NCF1CA8MVU1 366 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 GNB5O14775 395 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 HS3ST1O14792 307 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 HCRTR2O43614 444 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 OR10H2O60403 315 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 BANF1O75531 89 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 STK16O75716 305 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 TGFB1P01137 390 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 NCF1P14598 390 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 ZNF16P17020 682 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 NAGAP17050 411 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 EPORP19235 508 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 CXCR5P32302 372 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 CDKN1AP38936 164 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 CD79BP40259 229 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 BUD31P41223 144 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 HSPA7P48741 367 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 ARFIP1P53367 373 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 HNRNPH2P55795 449 aaKnown RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 TAS2R39P59534 338 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 IRF8Q02556 426 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 FUT7Q11130 342 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 CHIT1Q13231 466 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 ZNF460Q14592 562 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 PDK4Q16654 411 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 KHDRBS2Q5VWX1 349 aaKnown RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 HLA-DQA1Q5Y7H0 255 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 C18orf63Q68DL7 685 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 SULT1C3Q6IMI6 304 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 SLC30A6Q6NXT4 461 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 TRMT10BQ6PF06 316 aaKnown RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 CCDC137Q6PK04 289 aaKnown RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 PLXDC2Q6UX71 529 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 ZC3HC1Q86WB0 502 aaKnown RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 IGDCC3Q8IVU1 814 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 TRIM42Q8IWZ5 723 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 LAS2Q8IYD9 372 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 ZCCHC7Q8N3Z6 543 aaKnown RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 ZNF611Q8N823 705 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 DOK4Q8TEW6 326 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 ANKRD49Q8WVL7 239 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 UBE2E3Q969T4 207 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 CMTM7Q96FZ5 175 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 OR2B2Q9GZK3 357 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 DERL2Q9GZP9 239 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 ESRP2Q9H6T0 727 aaKnown RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 POPDC3Q9HBV1 291 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 EXO1Q9UQ84 846 aaKnown RBP8.52□□□□□ -1.05
NEDD9-203ENST00000397378 DLGAP4Q9Y2H0 992 aa8.52□□□□□ -1.05
NEDD9-203ENST00000397378 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-203ENST00000397378 FAM95CA0A1B0GW59 222 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 LRRC14BA6NHZ5 514 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 PLOD2O00469 737 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 PLPP1O14494 284 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 TCF21O43680 179 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 LMX1BO60663 402 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 PRKRAO75569 313 aaKnown RBP8.51□□□□□ -1.05
NEDD9-203ENST00000397378 PLAUP00749 431 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 ABCB1P08183 1280 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-203ENST00000397378 SLC35E2BP0CK96 405 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 SLC35E2P0CK97 266 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 ABCD3P28288 659 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 SSTR4P31391 388 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 CCKARP32238 428 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 UGT2B10P36537 528 aa8.51□□□□□ -1.05
NEDD9-203ENST00000397378 LHX2P50458 406 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms