RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 SMARCD3Q6STE5 483 aa12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 C16orf62Q7Z3J2 963 aa12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 RD3Q7Z3Z2 195 aa12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 LRRTM4Q86VH4 590 aa12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 FAM129CQ86XR2 697 aa12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 TP53INP1Q96A56 240 aa12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 FAM46AQ96IP4 442 aaKnown RBP12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 OR2A14Q96R47 310 aa12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 CACYBPQ9HB71 228 aaKnown RBP12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 TBC1D24Q9ULP9 559 aa12.4□□□□□ -0.42
HMBOX1-203ENST00000397358 B4GALT2O60909 372 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 HMGN2P05204 90 aaKnown RBP12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 HTRA3P83110 453 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SLAMF1Q13291 335 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 ELOAQ14241 798 aaKnown RBP12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SLC30A6Q6NXT4 461 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 FAM92BQ6ZTR7 304 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 NANOGP1Q8N7R0 232 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 TMEM145Q8NBT3 493 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 POF1BQ8WVV4 589 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 RASSF5Q8WWW0 418 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 PPP1R16AQ96I34 528 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 COQ10AQ96MF6 247 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SLC38A2Q96QD8 506 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SDHCQ99643 169 aaPredicted RBP12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 TMEM246Q9BRR3 403 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 FAIM2Q9BWQ8 316 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 MS4A8Q9BY19 250 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 GLIPR2Q9H4G4 154 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 THSD7BQ9C0I4 1608 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 GSAPA4D1B5 854 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 RECKO95980 971 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 RPN2P04844 631 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 BSGP35613 385 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 CRYBB2P43320 205 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SMSP52788 366 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 RPS7P62081 194 aaKnown RBP12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 QPRTQ15274 297 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 MEDAGQ5VYS4 303 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 LCTLQ6UWM7 567 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 PROKR2Q8NFJ6 384 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 KLHL31Q9H511 634 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SAGE1Q9NXZ1 904 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SNTNA6NMZ2 147 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 ADH1CP00326 375 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SOD1P00441 154 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 BMPR1AP36894 532 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 HTR3AP46098 478 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 ZNF791Q3KP31 576 aaPredicted RBP12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SYT14P1Q58G82 188 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 PLET1Q6UQ28 207 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 ATP6V1C2Q8NEY4 427 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 UFD1Q92890 307 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 LRIG1Q96JA1 1093 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 NXF2Q9GZY0 626 aaKnown RBP12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 SLC22A4Q9H015 551 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 HDHD2Q9H0R4 259 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 DKK3Q9UBP4 350 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 NTNG1Q9Y2I2 539 aa12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 TMA7Q9Y2S6 64 aaKnown RBP12.39□□□□□ -0.43
HMBOX1-203ENST00000397358 C2orf92A0A1B0GVN3 265 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 ZNF670-ZNF695F2Z2N8 137 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 PGRMC2O15173 223 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 APEX1P27695 318 aaKnown RBP12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 OPRD1P41143 372 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 GPR4P46093 362 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 SLC9A5Q14940 896 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 OR4C11Q6IEV9 310 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 ZNF770Q6IQ21 691 aaPredicted RBP12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 MARCH9Q86YJ5 346 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 OR4F15Q8NGB8 312 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 ZNF582Q96NG8 517 aaPredicted RBP12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 NECTIN4Q96NY8 510 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 SPATA5L1Q9BVQ7 753 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 PLA2G12AQ9BZM1 189 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 SAP130Q9H0E3 1048 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 RHBGQ9H310 441 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 TMEM245Q9H330 911 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 RANGRFQ9HD47 186 aaPredicted RBP12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 SLC35C2Q9NQQ7 365 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 CLEC4AQ9UMR7 237 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 CD8B2A6NJW9 211 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 OR52A4PA6NMU1 304 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 LILRB3O75022 631 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 CLTBP09497 229 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 CD8BP10966 210 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 ITGB8P26012 769 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 LIMS1P48059 325 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 SNRPGP62308 76 aaKnown RBP12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 KLHL22Q53GT1 634 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 GLCCI1Q86VQ1 547 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 VRK2Q86Y07 508 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 LRRC3BQ96PB8 259 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 GPA33Q99795 319 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 A4GALTQ9NPC4 353 aa12.38□□□□□ -0.43
HMBOX1-203ENST00000397358 PLSCR3Q9NRY6 295 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms