RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SHQ1Q6PI26 577 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ISLR2Q6UXK2 745 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 STK32CQ86UX6 486 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 MARCH9Q86YJ5 346 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ZDHHC21Q8IVQ6 265 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 METTL27Q8N6F8 245 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 TRIML2Q8N7C3 387 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 AMER3Q8N944 861 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 PNPT1Q8TCS8 783 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ADAMTS16Q8TE57 1224 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 CYGBQ8WWM9 190 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 PMEPA1Q969W9 287 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 CIDECQ96AQ7 238 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 SDCCAG3Q96C92 435 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 MMABQ96EY8 250 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 CFAP54Q96N23 3096 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 RBM4BQ9BQ04 359 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 DPH2Q9BQC3 489 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 DDA1Q9BW61 102 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 RBM4Q9BWF3 364 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 TMEM38AQ9H6F2 299 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 EPS8L2Q9H6S3 715 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 LYARQ9NX58 379 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 TAS2R9Q9NYW1 312 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 IFT80Q9P2H3 777 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 TMEM229AB2RXF0 380 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 TMPRSS11DO60235 418 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 RDH16O75452 317 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 BMP10O95393 424 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 NTRK1P04629 796 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 IST1P53990 364 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 TRA2BP62995 288 aaKnown RBP14□□□□□ -0.17
CAPN3-207ENST00000397200 EEF1A2Q05639 463 aaKnown RBP14□□□□□ -0.17
CAPN3-207ENST00000397200 SLAMF1Q13291 335 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 PUM1Q14671 1186 aaKnown RBP eCLIP14□□□□□ -0.17
CAPN3-207ENST00000397200 IQCCQ4KMZ1 466 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 TMEM164Q5U3C3 297 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 C1orf189Q5VU69 101 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 CCDC80Q76M96 950 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 TMEM179BQ7Z7N9 219 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 HIPK1Q86Z02 1210 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 C11orf65Q8NCR3 313 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 TM4SF18Q96CE8 201 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 RNF31Q96EP0 1072 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 SLC35A5Q9BS91 424 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 NPLQ9BXD5 320 aaPredicted RBP14□□□□□ -0.17
CAPN3-207ENST00000397200 YTHDF1Q9BYJ9 559 aaKnown RBP14□□□□□ -0.17
CAPN3-207ENST00000397200 ULBP3Q9BZM4 244 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 RAD21L1Q9H4I0 556 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 VNN3Q9NY84 501 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 MAGED1Q9Y5V3 778 aaPredicted RBP14□□□□□ -0.17
CAPN3-207ENST00000397200 B3GALT1Q9Y5Z6 326 aa14□□□□□ -0.17
CAPN3-207ENST00000397200 H0YIG0 161 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 GCM2O75603 506 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-207ENST00000397200 NUDT7P0C024 238 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 OLR1P78380 273 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 CNPY1Q3B7I2 92 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.99□□□□□ -0.17
CAPN3-207ENST00000397200 CLEC4FQ8N1N0 589 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 HSH2DQ96JZ2 352 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 MBOAT4Q96T53 435 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 POLR1BQ9H9Y6 1135 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 ZNF304Q9HCX3 659 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 FBXW2Q9UKT8 454 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 ABCG2Q9UNQ0 655 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 PCDHGA8Q9Y5G5 932 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 PCDHGA3Q9Y5H0 932 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 MAU2Q9Y6X3 613 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 PIEZO1Q92508 2521 aa13.99□□□□□ -0.17
CAPN3-207ENST00000397200 A0A1W2PRB8 838 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 GUCY1B2O75343 617 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 TNFSF15O95150 251 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 ZNF682O95780 498 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 FABP3P05413 133 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 ATP6V1B1P15313 513 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 ZNF28P17035 718 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 DDX5P17844 614 aaKnown RBP13.98□□□□□ -0.17
CAPN3-207ENST00000397200 OR1D4P47884 311 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 LIM2P55344 173 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 GABREP78334 506 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 RUNX2Q13950 521 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 RFX4Q33E94 735 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 GCNT6Q5T4J0 391 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 OR2T5Q6IEZ7 315 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 MRM1Q6IN84 353 aaKnown RBP13.98□□□□□ -0.17
CAPN3-207ENST00000397200 TTC33Q6PID6 262 aaPredicted RBP13.98□□□□□ -0.17
CAPN3-207ENST00000397200 SLC38A9Q8NBW4 561 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 OR5T3Q8NGG3 340 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 OR2T29Q8NH02 315 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 COL26A1Q96A83 441 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 NRBF2Q96F24 287 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 MAPKAP1Q9BPZ7 522 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 GRIP2Q9C0E4 1043 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 LYRM4Q9HD34 91 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 MIEF1Q9NQG6 463 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 HCN3Q9P1Z3 774 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 TMEFF2Q9UIK5 374 aaPredicted RBP13.98□□□□□ -0.17
CAPN3-207ENST00000397200 PHF11Q9UIL8 331 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 DAPP1Q9UN19 280 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 FAF1Q9UNN5 650 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms