RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 C17orf113A0A1B0GUU1 675 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 CHRNA1P02708 482 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 PMPCAQ10713 525 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 AGAP7PQ5VUJ5 663 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 AGAP6Q5VW22 663 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 IL34Q6ZMJ4 242 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 GOLGA7Q7Z5G4 137 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 AGAP4Q96P64 663 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 SEMA6CQ9H3T2 930 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 ARPC5O15511 151 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 PEX10O60683 326 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 MPIG6BO95866 241 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 ABOP16442 354 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 UBE2G2P60604 165 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 PLAC9Q5JTB6 97 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 ZNF761Q86XN6 746 aaPredicted RBP11.8□□□□□ -0.52
SMU1-201ENST00000397149 CLDN19Q8N6F1 224 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 HPSE2Q8WWQ2 592 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 NUSAP1Q9BXS6 441 aaKnown RBP11.8□□□□□ -0.52
SMU1-201ENST00000397149 RABL2AQ9UBK7 228 aaPredicted RBP11.8□□□□□ -0.52
SMU1-201ENST00000397149 ACSL6Q9UKU0 697 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 IRS2Q9Y4H2 1338 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 FEZF1A0PJY2 475 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 SYT7O43581 403 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 ITM2AO43736 263 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
SMU1-201ENST00000397149 GALTP07902 379 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 PPP2CAP67775 309 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 PLA2G7Q13093 441 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 REEP6Q96HR9 211 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 CWH43Q9H720 699 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 HRASLSQ9HDD0 168 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 OBP2BQ9NPH6 170 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 NLE1Q9NVX2 485 aaPredicted RBP11.8□□□□□ -0.52
SMU1-201ENST00000397149 ADARB1P78563 741 aaKnown RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 KCTD20Q7Z5Y7 419 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 CARM1Q86X55 608 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 NUP43Q8NFH3 380 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 C7orf26Q96N11 449 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 KCNA7Q96RP8 456 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 ZMAT5Q9UDW3 170 aaKnown RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 JCADQ9P266 1359 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 NPIPA5A0A0B4J1W7 369 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 NRP1O14786 923 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 GRIN2CQ14957 1233 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 PDLIM3Q53GG5 364 aaPredicted RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 WDR53Q7Z5U6 358 aaPredicted RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 PPTC7Q8NI37 304 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 ADAM19Q9H013 955 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 MAGI3Q5TCQ9 1506 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 TRAV18A0A075B6X5 111 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 SMIM35A0A1B0GVV1 85 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 RAB35Q15286 201 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 GID4Q8IVV7 300 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 CMTM8Q8IZV2 173 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 OR51L1Q8NGJ5 315 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 CNIH3Q8TBE1 160 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 C10orf82Q8WW14 230 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 G6PC3Q9BUM1 346 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 GPR174Q9BXC1 333 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 FSCN2O14926 492 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 KLF8O95600 359 aaPredicted RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 CHRM4P08173 479 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 TGFBIQ15582 683 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 PTCHD3Q3KNS1 767 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 DCP2Q8IU60 420 aaKnown RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 CHD1O14646 1710 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 DCDC2BA2VCK2 349 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 CRXO43186 299 aaPredicted RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 F3P13726 295 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 ZNF44P15621 663 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 RPL7P18124 248 aaKnown RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 MAP2K3P46734 347 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 PCBP1Q15365 356 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMU1-201ENST00000397149 SIRPB2Q5JXA9 342 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 TRMT10BQ6PF06 316 aaKnown RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 ZNF783Q6ZMS7 281 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 OR2T33Q8NG76 320 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 WFIKKN2Q8TEU8 576 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 SLC35F5Q8WV83 523 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 FBXW5Q969U6 566 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 OR5B2Q96R09 309 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 TMEM9Q9P0T7 183 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 SAMD9LQ8IVG5 1584 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 DVL2O14641 736 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 LRRTM2O43300 516 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 LAMTOR5O43504 91 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 G6PDP11413 515 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 BMP4P12644 408 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 DEFA4P12838 97 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 PRDX6P30041 224 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 HOXA1P49639 335 aaPredicted RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 FPGSQ05932 587 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 TEAD2Q15562 447 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 RAB30Q15771 203 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 Q1RN00 199 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 SLC36A3Q495N2 470 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 TMEM41BQ5BJD5 291 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 BEX5Q5H9J7 111 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms