RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 Q6ZNB5 142 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 IL17RCQ8NAC3 791 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 SENP5Q96HI0 755 aaPredicted RBP22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 POLR2J3Q9H1A7 115 aaKnown RBP22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 ZFP64Q9NPA5 681 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 KCND3Q9UK17 655 aa22.71■■□□□ 1.23
CSNK1E-203ENST00000396832 FURINP09958 794 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 PTPN5P54829 565 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 SNAPC1Q16533 368 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 BICRALQ6AI39 1079 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 MED27Q6P2C8 311 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 DEFB128Q7Z7B8 93 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 OXR1Q8N573 874 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 DTX3Q8N9I9 347 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 LYSMD1Q96S90 227 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 ZNF222Q9UK12 451 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 TPOP07202 933 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 ZNF630Q2M218 657 aaPredicted RBP22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 TRILQ7L0X0 811 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 PLA2G15Q8NCC3 412 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 HEXA-AS1Q9H8Q6 139 aa22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 MRPL39Q9NYK5 338 aaKnown RBP22.7■■□□□ 1.22
CSNK1E-203ENST00000396832 A0A1W2PRB8 838 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 URODP06132 367 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 NR2F6P10588 404 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 PCBP3P57721 371 aaKnown RBP22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 SUZ12Q15022 739 aaKnown RBP22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 TYW3Q6IPR3 259 aaKnown RBP22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 PLEKHM3Q6ZWE6 761 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 RASGEF1AQ8N9B8 481 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 OR11H4Q8NGC9 324 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 SLC6A16Q9GZN6 736 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 HDHD2Q9H0R4 259 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 RANBP3Q9H6Z4 567 aaPredicted RBP22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 MIEF1Q9NQG6 463 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 UCKL1Q9NWZ5 548 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 TESQ9UGI8 421 aaKnown RBP22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 PLAGL1Q9UM63 463 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 RABL2BQ9UNT1 228 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 MGAT4BQ9UQ53 548 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 SCN5AQ14524 2016 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 ANKDD1BA6NHY2 528 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 SNTA1Q13424 505 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 DCST1Q5T197 706 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 BCL2L15Q5TBC7 163 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 ASTLQ6HA08 431 aaPredicted RBP22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 BRAT1Q6PJG6 821 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 C16orf62Q7Z3J2 963 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 C16orf78Q8WTQ4 265 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 UCN3Q969E3 161 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 CXorf36Q9H7Y0 433 aa22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 RC3H2Q9HBD1 1191 aaKnown RBP22.69■■□□□ 1.22
CSNK1E-203ENST00000396832 LZTS3O60299 673 aaPredicted RBP22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 TALDO1P37837 337 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 HSPB3Q12988 150 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 TPBGQ13641 420 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 AANATQ16613 207 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 FAM92BQ6ZTR7 304 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 GOT1L1Q8NHS2 421 aaPredicted RBP22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 ZNF480Q8WV37 535 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 LSM7Q9UK45 103 aaKnown RBP22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 ANGPT4Q9Y264 503 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 TSPAN4O14817 238 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 CATP04040 527 aaKnown RBP22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 HK1P19367 917 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 DDCP20711 480 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 PTBP1P26599 531 aaKnown RBP eCLIP22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 DSTNP60981 165 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 BTG1P62324 171 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 GPR176Q14439 515 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 FGFBP1Q14512 234 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 SYT14P1Q58G82 188 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 FAM122CQ6P4D5 195 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 TMEM107Q6UX40 140 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 UNC5DQ6UXZ4 953 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 HORMAD2Q8N7B1 307 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 UFD1Q92890 307 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 ECHDC3Q96DC8 303 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 LRR1Q96L50 414 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 IL17FQ96PD4 163 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 DPCDQ9BVM2 203 aaPredicted RBP22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 BHLHE41Q9C0J9 482 aaPredicted RBP22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 BRF2Q9HAW0 419 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 RNF186Q9NXI6 227 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 PHF11Q9UIL8 331 aa22.68■■□□□ 1.22
CSNK1E-203ENST00000396832 A0A1W2PQ45 241 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 A0A1W2PQY0 241 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 C5orf58C9J3I9 102 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 UGDHO60701 494 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 SELPP16109 830 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 ELAVL4P26378 380 aaKnown RBP22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 GALEQ14376 348 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 SLCO4C1Q6ZQN7 724 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 ASB18Q6ZVZ8 466 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 FAM26EQ8N5C1 309 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 ZNF655Q8N720 491 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 SLC43A3Q8NBI5 491 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 LHFPL5Q8TAF8 219 aa22.67■■□□□ 1.22
CSNK1E-203ENST00000396832 PMEPA1Q969W9 287 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms