RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ABHD17BQ5VST6 288 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 SLC6A19Q695T7 634 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 GPR139Q6DWJ6 353 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 TMEM53Q6P2H8 277 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 ZNF598Q86UK7 904 aaKnown RBP14.88□□□□□ -0.03
GNE-202ENST00000396594 ZNF595Q8IYB9 648 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 SYNPOQ8N3V7 929 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 SPTSSAQ969W0 71 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 TAMM41Q96BW9 452 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 NANSQ9NR45 359 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 EMC3Q9P0I2 261 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 FTSJ1Q9UET6 329 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 LRP5O75197 1615 aa14.88□□□□□ -0.03
GNE-202ENST00000396594 BORCS7-ASMTA0A0B4J1R7 106 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 NAP1L6A6NFF2 107 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 MECP2P51608 486 aaKnown RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 E2F1Q01094 437 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 PTPRCAPQ14761 206 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 PON2Q15165 354 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 ZNF100Q8IYN0 542 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 OR6N2Q8NGY6 317 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 LRRC15Q8TF66 581 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 TMEM40Q8WWA1 233 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 FOXRED1Q96CU9 486 aaPredicted RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 TCTN2Q96GX1 697 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 CCNL2Q96S94 520 aaPredicted RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 HAPLN2Q9GZV7 340 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 SMG9Q9H0W8 520 aaKnown RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 NT5DC2Q9H857 520 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 PLAGL1Q9UM63 463 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 HS3ST3A1Q9Y663 406 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 ITGB1P05556 798 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 CD3GP09693 182 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 GLULP15104 373 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 NPRL3Q12980 569 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 OGFRL1Q5TC84 451 aaPredicted RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 RNF220Q5VTB9 566 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 GARNL3Q5VVW2 1013 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 C3orf33Q6P1S2 294 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 PRSS48Q7RTY5 328 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 TMEM25Q86YD3 366 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 OR14A16Q8NHC5 309 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 KCNK13Q9HB14 408 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 BTAF1O14981 1849 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 S100A6P06703 90 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 IRF2P14316 349 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 EFNA1P20827 205 aaPredicted RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 AGTR1P30556 359 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 RBMXP38159 391 aaKnown RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 LBX1P52954 281 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 MXD1Q05195 221 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 COMMD6Q7Z4G1 85 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 UEVLDQ8IX04 471 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 NPWQ8N729 165 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 PAPD5Q8NDF8 572 aaKnown RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 AMDHD1Q96NU7 426 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 C7orf50Q9BRJ6 194 aaKnown RBP14.87□□□□□ -0.03
GNE-202ENST00000396594 GORASP2Q9H8Y8 452 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 ALG5Q9Y673 324 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 GCGRP47871 477 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 SLC9A3P48764 834 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 CDK3Q00526 305 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 DEFB134Q4QY38 66 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 SIX5Q8N196 739 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 ACSS2Q9NR19 701 aa14.87□□□□□ -0.03
GNE-202ENST00000396594 CDRT1O95170 752 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 DIRAS3O95661 229 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 PRLP01236 227 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 UCHL1P09936 223 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 PRKCAP17252 672 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 MYF6P23409 242 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 S100A7P31151 101 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 CD68P34810 354 aaPredicted RBP14.86□□□□□ -0.03
GNE-202ENST00000396594 CAMK2DQ13557 499 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 OR4D1Q15615 310 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 EXOC3L2Q2M3D2 409 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 NADK2Q4G0N4 442 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 TMEM52BQ4KMG9 183 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 MARCH8Q5T0T0 291 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.86□□□□□ -0.03
GNE-202ENST00000396594 FAM83HQ6ZRV2 1179 aaPredicted RBP14.86□□□□□ -0.03
GNE-202ENST00000396594 LARP4Q71RC2 724 aaKnown RBP eCLIP14.86□□□□□ -0.03
GNE-202ENST00000396594 RFT1Q96AA3 541 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 KCNA7Q96RP8 456 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 A0A1W2PPL8 197 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 A8MU76 341 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 CXCR4P61073 352 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 SEMG2Q02383 582 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 ZNF252P-AS1Q0IIN9 211 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 OPN5Q6U736 354 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 LIPIQ6XZB0 460 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 TTLL10Q6ZVT0 673 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 KIAA0907Q7Z7F0 614 aaPredicted RBP14.86□□□□□ -0.03
GNE-202ENST00000396594 SPAG16Q8N0X2 631 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 KCT2Q8NC54 265 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 IL26Q9NPH9 171 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 MARCH4Q9P2E8 410 aaPredicted RBP14.86□□□□□ -0.03
GNE-202ENST00000396594 LOC102725191A0A1B0GVB3 256 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 PRH1P02810 166 aa14.86□□□□□ -0.03
GNE-202ENST00000396594 PRKCDQ05655 676 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms