RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 RAB40BQ12829 278 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF77Q15935 545 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 TMIGD1Q6UXZ0 262 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 TECPR1Q7Z6L1 1165 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 ADGRD2Q7Z7M1 963 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 PDZD3Q86UT5 571 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 TMEM25Q86YD3 366 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 RBM45Q8IUH3 476 aaKnown RBP12.59□□□□□ -0.39
TRIM40-207ENST00000396581 MMP21Q8N119 569 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 CADM2Q8N3J6 435 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 CAMKK1Q8N5S9 505 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 CELF5Q8N6W0 485 aaKnown RBP12.59□□□□□ -0.39
TRIM40-207ENST00000396581 OR52P1PQ8NH57 321 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 GLYATL1Q969I3 302 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 ZBED6CLQ96FA7 236 aaPredicted RBP12.59□□□□□ -0.39
TRIM40-207ENST00000396581 LRR1Q96L50 414 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 MARVELD1Q9BSK0 173 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 RIOK2Q9BVS4 552 aaKnown RBP12.59□□□□□ -0.39
TRIM40-207ENST00000396581 BEX2Q9BXY8 128 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 EPHX3Q9H6B9 360 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 MVB12BQ9H7P6 319 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 WDR70Q9NW82 654 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 FAM8A1Q9UBU6 413 aa12.59□□□□□ -0.39
TRIM40-207ENST00000396581 YARS2Q9Y2Z4 477 aaKnown RBP12.59□□□□□ -0.39
TRIM40-207ENST00000396581 TRDV1A0A1B0GX56 115 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 MMP20O60882 483 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 B4GALT2O60909 372 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 DDCP20711 480 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 APEX1P27695 318 aaKnown RBP12.58□□□□□ -0.39
TRIM40-207ENST00000396581 PBX2P40425 430 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 IL12RB1P42701 662 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 TAP2Q03519 686 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 ENTPD8Q5MY95 495 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 C1orf94Q6P1W5 598 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 TRILQ7L0X0 811 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 SLC9B2Q86UD5 537 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 OR2A12Q8NGT7 310 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 HCAR2Q8TDS4 363 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 UBASH3BQ8TF42 649 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 SLC5A11Q8WWX8 675 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 UBE2E3Q969T4 207 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 OTUB2Q96DC9 234 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF764Q96H86 408 aaPredicted RBP12.58□□□□□ -0.39
TRIM40-207ENST00000396581 WFDC6Q9BQY6 131 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 ARHGAP9Q9BRR9 750 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 IRF2BPLQ9H1B7 796 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 NEUROD4Q9HD90 331 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 MIEF1Q9NQG6 463 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 SEMA3GQ9NS98 782 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 SLC25A13Q9UJS0 675 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 ALG5Q9Y673 324 aa12.58□□□□□ -0.39
TRIM40-207ENST00000396581 SGK494L7N484 410 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 HMGN4O00479 90 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 PRODHO43272 600 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 SLC43A1O75387 559 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 CCNYL3P0C7X3 344 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 SLC2A2P11168 524 aaPredicted RBP12.58□□□□□ -0.4
TRIM40-207ENST00000396581 MYL12AP19105 171 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 TNNI3P19429 210 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 MMP11P24347 488 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 EVX1P49640 407 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 MAN2A2P49641 1150 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 PCBP4P57723 403 aaKnown RBP12.58□□□□□ -0.4
TRIM40-207ENST00000396581 TMEM115Q12893 351 aaPredicted RBP12.58□□□□□ -0.4
TRIM40-207ENST00000396581 ACSM5Q6NUN0 579 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 MZT2BQ6NZ67 158 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 TNFAIP8L2Q6P589 184 aaPredicted RBP12.58□□□□□ -0.4
TRIM40-207ENST00000396581 PODNL1Q6PEZ8 512 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 PAMR1Q6UXH9 720 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 DEF8Q6ZN54 512 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 Q6ZVU0 165 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 CREB3L2Q70SY1 520 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF767PQ75MW2 155 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 ZER1Q7Z7L7 766 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 IQCF1Q8N6M8 205 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 SYT14Q8NB59 555 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 UFD1Q92890 307 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 IRF7Q92985 503 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 TMEM203Q969S6 136 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 COQ7Q99807 217 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 TMEM43Q9BTV4 400 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF717Q9BY31 904 aaPredicted RBP12.58□□□□□ -0.4
TRIM40-207ENST00000396581 PBX4Q9BYU1 374 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 LINC00597Q9H2U6 94 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
TRIM40-207ENST00000396581 MAN2C1Q9NTJ4 1040 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 GSTK1Q9Y2Q3 226 aa12.58□□□□□ -0.4
TRIM40-207ENST00000396581 NME6O75414 186 aaPredicted RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 WEE1P30291 646 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 PKLRP30613 574 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 SSTR4P31391 388 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 HTR2BP41595 481 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 RPS26P62854 115 aaKnown RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 FABP5Q01469 135 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 FOXD4Q12950 439 aaPredicted RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 GINS1Q14691 196 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF284Q2VY69 593 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 CRTC2Q53ET0 693 aaPredicted RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 SIGIRRQ6IA17 410 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms