RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 EOGTQ5NDL2 527 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TEX26Q8N6G2 289 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 RHEBL1Q8TAI7 183 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 SLC35F5Q8WV83 523 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 LRRC46Q96FV0 321 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TGM7Q96PF1 710 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 PRTFDC1Q9NRG1 225 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 PCYT1BQ9Y5K3 369 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 GRPRP30550 384 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 ERVK-25P63136 954 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 EVX2Q03828 476 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 OLIG2Q13516 323 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TLDC1Q6P9B6 456 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 KCTD20Q7Z5Y7 419 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TSPYL5Q86VY4 417 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 Q8N9G6 341 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 APMAPQ9HDC9 416 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 ACOT13Q9NPJ3 140 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TEX10Q9NXF1 929 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 ARVCFO00192 962 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TP53I11O14683 189 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 EMC8O43402 210 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 ADORA3P0DMS8 318 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 FECHP22830 423 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 SHMT2P34897 504 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 GPR4P46093 362 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 LSAMPQ13449 338 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 FAM83HQ6ZRV2 1179 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 CPNE8Q86YQ8 564 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 TRIB2Q92519 343 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 FAM46AQ96IP4 442 aaKnown RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 hCG_1807616A0A1W2PRN6 198 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 LCKP06239 509 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 RETP07949 1114 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 CERS1P27544 350 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 PTPN6P29350 595 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 GGT2P36268 569 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 RPP30P78346 268 aaKnown RBP13.36□□□□□ -0.27
COL4A3-202ENST00000396578 VWA5B2Q8N398 1253 aa13.36□□□□□ -0.27
COL4A3-202ENST00000396578 UPK1BO75841 260 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 MC2RQ01718 297 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 PCGF3Q3KNV8 242 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 PRRT3Q5FWE3 981 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 DPY19L4Q7Z388 723 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 OR51D1Q8NGF3 324 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 SNAPC3Q92966 411 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 PTERQ96BW5 349 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ZDHHC12Q96GR4 267 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 NUBP2Q9Y5Y2 271 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ACTL6BO94805 426 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 TIA1P31483 386 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 GALNT10Q86SR1 603 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 MINDY1Q8N5J2 469 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 C2orf74A8MZ97 194 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 BEST1O76090 585 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 TMEM115Q12893 351 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 TXNRD3NBQ6F5E7 133 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 TMEM107Q6UX40 140 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 MRPL41Q8IXM3 137 aaKnown RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 PLD6Q8N2A8 252 aaKnown RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 LRRC25Q8N386 305 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 MS4A15Q8N5U1 240 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 OR52E2Q8NGJ4 325 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 C22orf15Q8WYQ4 148 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ITPKCQ96DU7 683 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 OR1F2PQ96R84 312 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 TWNKQ96RR1 684 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 SACM1LQ9NTJ5 587 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 NAALAD2Q9Y3Q0 740 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ARGFXA6NJG6 315 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 FTCDNL1E5RQL4 147 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 NFATC3Q12968 1075 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF440Q8IYI8 595 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 FZD8Q9H461 694 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 SRA1Q9HD15 236 aaKnown RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 GPR83Q9NYM4 423 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 AJAP1Q9UKB5 411 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ASB4Q9Y574 426 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 NAV1Q8NEY1 1877 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 GDI1P31150 447 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 PREPP48147 710 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 CES4AQ5XG92 561 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 CMTM1Q8IZ96 169 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 H7BY64 318 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ASGR2P07307 311 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 TPT1P13693 172 aaKnown RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 SFRP4Q6FHJ7 346 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 SLC15A4Q8N697 577 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 OR52P1PQ8NH57 321 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 LMX1AQ8TE12 382 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 GLYATL1Q969I3 302 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 PRAP1Q96NZ9 151 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 CNOT11Q9UKZ1 510 aaKnown RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 A6NLC8 198 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 TYROBPO43914 113 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 CHRNB1P11230 501 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms