RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 LEXMQ3ZCV2 418 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 TMEM107Q6UX40 140 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ZNF367Q7RTV3 350 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 IGFN1Q86VF2 1251 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 DRAXINQ8NBI3 349 aaPredicted RBP15.8■□□□□ 0.12
NUP50-202ENST00000396096 OR6Q1Q8NGQ2 317 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 CHPT1Q8WUD6 406 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ELP4Q96EB1 424 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 C10orf90Q96M02 699 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 PRRC1Q96M27 445 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ALOXE3Q9BYJ1 711 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ROGDIQ9GZN7 287 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 SLIRPQ9GZT3 109 aaKnown RBP15.8■□□□□ 0.12
NUP50-202ENST00000396096 SRMSQ9H3Y6 488 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 MAN2C1Q9NTJ4 1040 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 NTMQ9P121 344 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ERGIC3Q9Y282 383 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 H0Y8X5 98 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 AIREO43918 545 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 PFDN1O60925 122 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 SULT1C4O75897 302 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 PTHP01270 115 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 SMIM10L1P0DMW3 83 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 NR2F6P10588 404 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ACADMP11310 421 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 FEN1P39748 380 aaKnown RBP15.8■□□□□ 0.12
NUP50-202ENST00000396096 XKP51811 444 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 LIMK1P53667 647 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 BTN3A2P78410 334 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 PIN1Q13526 163 aaPredicted RBP15.8■□□□□ 0.12
NUP50-202ENST00000396096 PODNL1Q6PEZ8 512 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ADCK1Q86TW2 530 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 NUP43Q8NFH3 380 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 NR4A3Q92570 626 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ZHX1-C8orf76Q96EF9 292 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 C16orf58Q96GQ5 468 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 SMIM10Q96HG1 83 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 Q96MT0 163 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 OR7D2Q96RA2 312 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 FNDC11Q9BVV2 318 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 POLR2J3Q9H1A7 115 aaKnown RBP15.8■□□□□ 0.12
NUP50-202ENST00000396096 PRDM9Q9NQV7 894 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 CALML5Q9NZT1 146 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ANKMY1Q9P2S6 941 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 LIPT1Q9Y234 373 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 CA5BQ9Y2D0 317 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 ZNF780BQ9Y6R6 833 aa15.8■□□□□ 0.12
NUP50-202ENST00000396096 A0A1W2PS29 197 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 C10orf142B7Z368 130 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 CNOT3O75175 753 aaKnown RBP15.79■□□□□ 0.12
NUP50-202ENST00000396096 C8orf89P0DMQ9 161 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 ALPPL2P10696 532 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 POU1F1P28069 291 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 ACTR1BP42025 376 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 ACTR1AP61163 376 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 YPEL5P62699 121 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 PLAG1Q6DJT9 500 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 FBXO42Q6P3S6 717 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 DCDC5Q6ZRR9 648 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 MFSD4AQ8N468 514 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 KCT2Q8NC54 265 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 MORN4Q8NDC4 146 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 OR6T1Q8NGN1 323 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 CCL4L1Q8NHW4 92 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 TSACCQ96A04 125 aaPredicted RBP15.79■□□□□ 0.12
NUP50-202ENST00000396096 COX4I2Q96KJ9 171 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 TRNT1Q96Q11 434 aaKnown RBP15.79■□□□□ 0.12
NUP50-202ENST00000396096 OR2A14Q96R47 310 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 YIPF4Q9BSR8 244 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 TRNAU1APQ9NX07 287 aaKnown RBP15.79■□□□□ 0.12
NUP50-202ENST00000396096 F5P12259 2224 aa15.79■□□□□ 0.12
NUP50-202ENST00000396096 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 MAGEB3O15480 346 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 NME6O75414 186 aaPredicted RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 RPLP0P05388 317 aaKnown RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 ZNF888P0CJ79 500 aaPredicted RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 GADD45AP24522 165 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 ACSL1P33121 698 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 PTGER1P34995 402 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 MC3RP41968 323 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 TNFRSF17Q02223 184 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 PRRT3Q5FWE3 981 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 MEDAGQ5VYS4 303 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 C19orf48Q6RUI8 117 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 OLIG3Q7RTU3 272 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 SAMD14Q8IZD0 417 aaPredicted RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 TMCO5AQ8N6Q1 288 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 OR9A2Q8NGT5 310 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 ZFPM2Q8WW38 1151 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 KLHL6Q8WZ60 621 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 GIMAP5Q96F15 307 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 OTUB1Q96FW1 271 aaPredicted RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 OR2A5Q96R48 311 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 ARHGDIGQ99819 225 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 TMEM168Q9H0V1 697 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 DCSTAMPQ9H295 470 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 SLC38A1Q9H2H9 487 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 C8orf33Q9H7E9 229 aaPredicted RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 CD93Q9NPY3 652 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 C11orf16Q9NQ32 467 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms