RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 DCAF7P61962 342 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 HMGCS1Q01581 520 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 PRICKLE4Q2TBC4 344 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 TMEM64Q6YI46 380 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 NCCRP1Q6ZVX7 275 aaPredicted RBP12.64□□□□□ -0.39
CXCL12-205ENST00000395794 MMP21Q8N119 569 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 ADCY4Q8NFM4 1077 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 OR5M9Q8NGP3 310 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 ADIPOR1Q96A54 375 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 ZNF597Q96LX8 424 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 SECISBP2Q96T21 854 aaKnown RBP12.64□□□□□ -0.39
CXCL12-205ENST00000395794 GSTO2Q9H4Y5 243 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 PNPLA3Q9NST1 481 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 QPCTLQ9NXS2 382 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 CNOT11Q9UKZ1 510 aaKnown RBP12.64□□□□□ -0.39
CXCL12-205ENST00000395794 EMCNQ9ULC0 261 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 CENPEQ02224 2701 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 CELSR2Q9HCU4 2923 aa12.64□□□□□ -0.39
CXCL12-205ENST00000395794 TEX15Q9BXT5 2789 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 TLDC2A0PJX2 215 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 ACOX3O15254 700 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 PLIN3O60664 434 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 TRAPPC6AO75865 159 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 LRATO95237 230 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 PROCP04070 461 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 SNRPB2P08579 225 aaKnown RBP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 CELA3AP09093 270 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 ANXA4P09525 319 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 NAGAP17050 411 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 KRT4P19013 534 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 GPX3P22352 226 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 ACVR2AP27037 513 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 GDF1P27539 372 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 CHRNB4P30926 498 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 TIA1P31483 386 aaKnown RBP eCLIP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 HTR6P50406 440 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 DNAJB13P59910 316 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 PMPCAQ10713 525 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 EXOSC7Q15024 291 aaKnown RBP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 ERCC6LQ2NKX8 1250 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 CRYBG3Q68DQ2 2970 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 FAM111BQ6SJ93 734 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 SCIMPQ6UWF3 145 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 GDF7Q7Z4P5 450 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 TICAM1Q8IUC6 712 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 CCDC116Q8IYX3 515 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 PRR22Q8IZ63 422 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 OR52R1Q8NGF1 315 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 OR10Q1Q8NGQ4 319 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 CDC26Q8NHZ8 85 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 SPPL2AQ8TCT8 520 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 EPS8L3Q8TE67 593 aaKnown RBP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 C16orf78Q8WTQ4 265 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 EXOSC8Q96B26 276 aaKnown RBP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 HSPBAP1Q96EW2 488 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 APIPQ96GX9 242 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 LCORQ96JN0 433 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 KCNA7Q96RP8 456 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 SHCBP1LQ9BZQ2 653 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 ZNF703Q9H7S9 590 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 METTL7AQ9H8H3 244 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 RRAGDQ9NQL2 400 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-205ENST00000395794 ALKBH4Q9NXW9 302 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 MAT2BQ9NZL9 334 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 SENP1Q9P0U3 644 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 LIPGQ9Y5X9 500 aa12.63□□□□□ -0.39
CXCL12-205ENST00000395794 MYO7BQ6PIF6 2116 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 SERTM1A2A2V5 107 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 FOXO6A8MYZ6 492 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 WDR1O75083 606 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 HOXD4P09016 255 aaPredicted RBP12.62□□□□□ -0.39
CXCL12-205ENST00000395794 GABRA1P14867 456 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 S1PR1P21453 382 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 DRD5P21918 477 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 ABCD3P28288 659 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 MPIP34949 423 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 IFFO1Q0D2I5 559 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 PLCXD2Q0VAA5 305 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 TOMM20Q15388 145 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 NNATQ16517 81 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 EMC4Q5J8M3 183 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 FAM180BQ6P0A1 224 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 GALNT18Q6P9A2 607 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 B3GNT6Q6ZMB0 384 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 FRMD7Q6ZUT3 714 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 SH2D5Q6ZV89 423 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 NUP54Q7Z3B4 507 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 SRRM1Q8IYB3 904 aaKnown RBP12.62□□□□□ -0.39
CXCL12-205ENST00000395794 C4orf33Q8N1A6 199 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 ERP27Q96DN0 273 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 CNRIP1Q96F85 164 aaPredicted RBP12.62□□□□□ -0.39
CXCL12-205ENST00000395794 ZNF681Q96N22 645 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 RILPQ96NA2 401 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 BBS4Q96RK4 519 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 EBPLQ9BY08 206 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 ITPAQ9BY32 194 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 ANGPTL4Q9BY76 406 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 NXF5Q9H1B4 397 aaKnown RBP12.62□□□□□ -0.39
CXCL12-205ENST00000395794 ACKR4Q9NPB9 350 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms