RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 LRFN1Q9P244 771 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 DTX4Q9Y2E6 619 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 TBX19O60806 448 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 DIAPH2O60879 1101 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 NME6O75414 186 aaPredicted RBP15.32■□□□□ 0.04
CXCL1-201ENST00000395761 OR6B1O95007 311 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 LBPP18428 481 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 EPHA3P29320 983 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 SOX3P41225 446 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 SSR4P51571 173 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 ARFIP2P53365 341 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 TLE1Q04724 770 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 MAD2L1Q13257 205 aaPredicted RBP15.32■□□□□ 0.04
CXCL1-201ENST00000395761 INPP5JQ15735 1006 aaPredicted RBP15.32■□□□□ 0.04
CXCL1-201ENST00000395761 PIGGQ5H8A4 983 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 ZNF766Q5HY98 468 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 OGFOD2Q6N063 350 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 SLC29A4Q7RTT9 530 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 SPATA21Q7Z572 469 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 FAM9CQ8IZT9 166 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 OR7G2Q8NG99 324 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 OR52R1Q8NGF1 315 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 C16orf52Q8NHV5 167 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 ZNF675Q8TD23 568 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 AMDHD1Q96NU7 426 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 TRIM4Q9C037 500 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 KLHL1Q9NR64 748 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 ASIC5Q9NY37 505 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 NOP53Q9NZM5 478 aaKnown RBP15.32■□□□□ 0.04
CXCL1-201ENST00000395761 BCAP29Q9UHQ4 241 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 ATP6V1HQ9UI12 483 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 DCTN4Q9UJW0 460 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 NTNG1Q9Y2I2 539 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 CROCCQ5TZA2 2017 aa15.32■□□□□ 0.04
CXCL1-201ENST00000395761 SPENQ96T58 3664 aaKnown RBP15.32■□□□□ 0.04
CXCL1-201ENST00000395761 C2orf92A0A1B0GVN3 265 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 OR6C76A6NM76 312 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 PYCARD-AS1I3L0S3 204 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 SCAMP2O15127 329 aaKnown RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 NADKO95544 446 aaPredicted RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 LAMP1P11279 417 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 EFNA1P20827 205 aaPredicted RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 NTSP30990 170 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 LSM12Q3MHD2 195 aaKnown RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 FHL5Q5TD97 284 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 METTL21CQ5VZV1 264 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 LYPD8Q6UX82 237 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 ACAD11Q709F0 780 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 ZNF551Q7Z340 670 aaPredicted RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 R3HCC1LQ7Z5L2 792 aaKnown RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 RIMKLAQ8IXN7 391 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 ZNF441Q8N8Z8 693 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 CPT1CQ8TCG5 803 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 C10orf82Q8WW14 230 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 ASB15Q8WXK1 588 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 ADIPOR1Q96A54 375 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 SNRNP40Q96DI7 357 aaKnown RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 MTERF3Q96E29 417 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 THOC1Q96FV9 657 aaKnown RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 ZNF764Q96H86 408 aaPredicted RBP15.31■□□□□ 0.04
CXCL1-201ENST00000395761 EBF4Q9BQW3 602 aa15.31■□□□□ 0.04
CXCL1-201ENST00000395761 A0A0G2JND7 137 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 CDK2AP1O14519 115 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 PDPK1O15530 556 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 ALDOCP09972 364 aaKnown RBP15.3■□□□□ 0.04
CXCL1-201ENST00000395761 PLA2G2AP14555 144 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 CD46P15529 392 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 GPX3P22352 226 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 HPCAL1P37235 193 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 MC3RP41968 323 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 EMDP50402 254 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 NR0B1P51843 470 aaKnown RBP15.3■□□□□ 0.04
CXCL1-201ENST00000395761 CLDN8P56748 225 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 SRSF11Q05519 484 aaKnown RBP15.3■□□□□ 0.04
CXCL1-201ENST00000395761 IGFBP7Q16270 282 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 HLA-DQA1Q5Y7H0 255 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 SLC25A25Q6KCM7 469 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 TMEM107Q6UX40 140 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 IL20RBQ6UXL0 311 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 TMEM64Q6YI46 380 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 MDGA2Q7Z553 956 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 SPATA19Q7Z5L4 167 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 SCMH1Q96GD3 660 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 OR52B2Q96RD2 323 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 TAAR6Q96RI8 345 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 TMEM120AQ9BXJ8 343 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 FAM107BQ9H098 131 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 TCF7L2Q9NQB0 619 aa15.3■□□□□ 0.04
CXCL1-201ENST00000395761 A8MVJ9 347 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 ANKRD28O15084 1053 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 PLOD3O60568 738 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 SLC25A12O75746 678 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 SP1P08047 785 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 PRPS1L1P21108 318 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 FRKP42685 505 aaPredicted RBP15.29■□□□□ 0.04
CXCL1-201ENST00000395761 IRX1P78414 480 aaPredicted RBP15.29■□□□□ 0.04
CXCL1-201ENST00000395761 HSPB3Q12988 150 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 MAPKAPK3Q16644 382 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 CPTPQ5TA50 214 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 NXNQ6DKJ4 435 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms