RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 STXBP1P61764 594 aaKnown RBP16.86■□□□□ 0.29
SREBF1-204ENST00000395756 FAM209AQ5JX71 171 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 COLEC12Q5KU26 742 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 ZNF425Q6IV72 752 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 BCDIN3DQ7Z5W3 292 aaKnown RBP16.86■□□□□ 0.29
SREBF1-204ENST00000395756 TAF8Q7Z7C8 310 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 ZNF605Q86T29 641 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 ASPGQ86U10 573 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 FBLIM1Q8WUP2 373 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 SLC9A6Q92581 669 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 TOE1Q96GM8 510 aaKnown RBP16.86■□□□□ 0.29
SREBF1-204ENST00000395756 PITHD1Q9GZP4 211 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-204ENST00000395756 POFUT2Q9Y2G5 429 aa16.86■□□□□ 0.29
SREBF1-204ENST00000395756 MRPS2Q9Y399 296 aaKnown RBP16.86■□□□□ 0.29
SREBF1-204ENST00000395756 J3QRK9 145 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 UGT2B7P16662 529 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 AKT2P31751 481 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 AHRP35869 848 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 GGT2P36268 569 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 TMBIM6P55061 237 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 TARDBPQ13148 414 aaKnown RBP eCLIP16.85■□□□□ 0.29
SREBF1-204ENST00000395756 USP30Q70CQ3 517 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 VASH1Q7L8A9 365 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-204ENST00000395756 NRROSQ86YC3 692 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 SLC22A18ASQ8N1D0 253 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 RAB2BQ8WUD1 216 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 NACC2Q96BF6 587 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 WBP11Q9Y2W2 641 aaKnown RBP16.85■□□□□ 0.29
SREBF1-204ENST00000395756 CPN2P22792 545 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 MPIP34949 423 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 CNR2P34972 360 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 FRKP42685 505 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-204ENST00000395756 MLLT10P55197 1068 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 DEFB110Q30KQ9 67 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 ADPRMQ3LIE5 342 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 DCST1Q5T197 706 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 SLC48A1Q6P1K1 146 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 PAQR7Q86WK9 346 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 NUP43Q8NFH3 380 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 ARSGQ96EG1 525 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 SCARF2Q96GP6 870 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-204ENST00000395756 OR2A14Q96R47 310 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 DOK1Q99704 481 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 ACOT13Q9NPJ3 140 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 HRASLS2Q9NWW9 162 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 MS4A12Q9NXJ0 267 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 ZNF226Q9NYT6 803 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 SCML1Q9UN30 329 aa16.85■□□□□ 0.29
SREBF1-204ENST00000395756 KDM1AO60341 852 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 KCNJ13O60928 360 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 LDB3O75112 727 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 SLC35G6P0C7Q6 338 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 OCM2P0CE71 109 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 OCMP0CE72 109 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-204ENST00000395756 DDX5P17844 614 aaKnown RBP16.84■□□□□ 0.29
SREBF1-204ENST00000395756 CHMP24386 653 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 KCNJ5P48544 419 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 MRPS21P82921 87 aaKnown RBP16.84■□□□□ 0.29
SREBF1-204ENST00000395756 OR5T3Q8NGG3 340 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 OR6T1Q8NGN1 323 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 FKBP10Q96AY3 582 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 COX4I2Q96KJ9 171 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 GAS2L1Q99501 681 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-204ENST00000395756 GABARAPL3Q9BY60 117 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 ANKMY1Q9P2S6 941 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 MKLN1Q9UL63 735 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 COL6A3P12111 3177 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 TDRD6O60522 2096 aaKnown RBP16.84■□□□□ 0.29
SREBF1-204ENST00000395756 FCMRO60667 390 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 ITIH1P19827 911 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 XKP51811 444 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 KIAA1024LP59773 190 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 NCS1P62166 190 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 CHRNEQ04844 493 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 RGS1Q08116 209 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 SRSF5Q13243 272 aaKnown RBP16.84■□□□□ 0.29
SREBF1-204ENST00000395756 ATP1A4Q13733 1029 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 EOGTQ5NDL2 527 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 FIGLAQ6QHK4 219 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 SLC16A12Q6ZSM3 486 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 NDNFQ8TB73 568 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 SLC7A13Q8TCU3 470 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 FAM131CQ96AQ9 280 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 ZNF354BQ96LW1 612 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 PHOX2BQ99453 314 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 GIMAP4Q9NUV9 329 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 TAS2R7Q9NYW3 318 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 ACTR10Q9NZ32 417 aa16.84■□□□□ 0.29
SREBF1-204ENST00000395756 ZNF701M0R085 212 aaPredicted RBP16.83■□□□□ 0.29
SREBF1-204ENST00000395756 H1F0P07305 194 aaKnown RBP16.83■□□□□ 0.29
SREBF1-204ENST00000395756 RFX3P48380 749 aa16.83■□□□□ 0.29
SREBF1-204ENST00000395756 LSSP48449 732 aa16.83■□□□□ 0.29
SREBF1-204ENST00000395756 CRISP3P54108 245 aa16.83■□□□□ 0.29
SREBF1-204ENST00000395756 MRM1Q6IN84 353 aaKnown RBP16.83■□□□□ 0.29
SREBF1-204ENST00000395756 PTCHD4Q6ZW05 846 aa16.83■□□□□ 0.29
SREBF1-204ENST00000395756 VRK2Q86Y07 508 aa16.83■□□□□ 0.29
SREBF1-204ENST00000395756 KRT73Q86Y46 540 aa16.83■□□□□ 0.29
SREBF1-204ENST00000395756 IQCF1Q8N6M8 205 aa16.83■□□□□ 0.29
SREBF1-204ENST00000395756 TBC1D15Q8TC07 691 aa16.83■□□□□ 0.29
SREBF1-204ENST00000395756 DENND4AQ7Z401 1863 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms