RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 RILPQ96NA2 401 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 SPNS1Q9H2V7 528 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 RABEP2Q9H5N1 569 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 WWOXQ9NZC7 414 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 NINJ2Q9NZG7 142 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 GDF2Q9UK05 429 aaPredicted RBP12.44□□□□□ -0.42
PFDN6-204ENST00000395131 PTBP2Q9UKA9 531 aaKnown RBP12.44□□□□□ -0.42
PFDN6-204ENST00000395131 RNF112Q9ULX5 631 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 DTX4Q9Y2E6 619 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 CRYL1Q9Y2S2 319 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 MED16Q9Y2X0 877 aa12.44□□□□□ -0.42
PFDN6-204ENST00000395131 MAGED1Q9Y5V3 778 aaPredicted RBP12.44□□□□□ -0.42
PFDN6-204ENST00000395131 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 PFDN6O15212 129 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 LRATO95237 230 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 ZNF16P17020 682 aaPredicted RBP12.43□□□□□ -0.42
PFDN6-204ENST00000395131 ARNTP27540 789 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 GCKP35557 465 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 SLC18A1P54219 525 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 DSCR9P59020 149 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 STX4Q12846 297 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 IFT88Q13099 833 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 EFTUD2Q15029 972 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■■■■ 32.6
PFDN6-204ENST00000395131 NRF1Q16656 503 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 ANKRD34AQ69YU3 496 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 TIGD3Q6B0B8 471 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 MRNIPQ6NTE8 343 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 C4orf22Q6V702 233 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 IL17RELQ6ZVW7 336 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 EXOC3L1Q86VI1 746 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 GRAMD2AQ8IUY3 354 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 CNPY4Q8N129 248 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 GBP7Q8N8V2 638 aaPredicted RBP12.43□□□□□ -0.42
PFDN6-204ENST00000395131 FAM47BQ8NA70 645 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 SMAP2Q8WU79 429 aaPredicted RBP12.43□□□□□ -0.42
PFDN6-204ENST00000395131 SENP5Q96HI0 755 aaPredicted RBP12.43□□□□□ -0.42
PFDN6-204ENST00000395131 KCNS2Q9ULS6 477 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 DLGAP4Q9Y2H0 992 aa12.43□□□□□ -0.42
PFDN6-204ENST00000395131 TP53I11O14683 189 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 EMC8O43402 210 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 SSX4O60224 188 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 VIMP08670 466 aaKnown RBP12.42□□□□□ -0.42
PFDN6-204ENST00000395131 SLC25A16P16260 332 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 ITGA2P17301 1181 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 HNF1AP20823 631 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 STIP1P31948 543 aaKnown RBP12.42□□□□□ -0.42
PFDN6-204ENST00000395131 KCNJ5P48544 419 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 GDF10P55107 478 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 ARL4CP56559 192 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 SRYQ05066 204 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 GPS1Q13098 491 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 TOMM20Q15388 145 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 OASLQ15646 514 aaKnown RBP12.42□□□□□ -0.42
PFDN6-204ENST00000395131 TOR1AIP1Q5JTV8 583 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 SBSNQ6UWP8 590 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 PIGWQ7Z7B1 504 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 YRDCQ86U90 279 aaKnown RBP12.42□□□□□ -0.42
PFDN6-204ENST00000395131 PPIL6Q8IXY8 311 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 CNEP1R1Q8N9A8 125 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 UHMK1Q8TAS1 419 aaKnown RBP12.42□□□□□ -0.42
PFDN6-204ENST00000395131 SPPL2AQ8TCT8 520 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 ATL1Q8WXF7 558 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 GAL3ST3Q96A11 431 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 FAR2Q96K12 515 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 ZNF317Q96PQ6 595 aaPredicted RBP12.42□□□□□ -0.42
PFDN6-204ENST00000395131 OR4K3Q96R72 315 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 SAYSD1Q9NPB0 183 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 KCNK9Q9NPC2 374 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 DAPP1Q9UN19 280 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 PDE10AQ9Y233 779 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 DHRS7Q9Y394 339 aa12.42□□□□□ -0.42
PFDN6-204ENST00000395131 PRKDCP78527 4128 aaKnown RBP12.41□□□□□ -0.42
PFDN6-204ENST00000395131 MYOCOSA0A1B0GUC4 107 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 EXOC1LA0A1B0GW35 172 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 SLC35F4A4IF30 521 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 CCT8L1PA6NM43 557 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 TP73O15350 636 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 GSTA1P08263 222 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 RPL22P35268 128 aaKnown RBP12.41□□□□□ -0.42
PFDN6-204ENST00000395131 CASP3P42574 277 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 MSH2P43246 934 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 MASP1P48740 699 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 VPS41P49754 854 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 LIM2P55344 173 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 GFRA1P56159 465 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 STXBP1P61764 594 aaKnown RBP12.41□□□□□ -0.42
PFDN6-204ENST00000395131 REEP5Q00765 189 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 RPS6KA2Q15349 733 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 BICRALQ6AI39 1079 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 FAM166AQ6J272 317 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 CILP2Q8IUL8 1156 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 TRIM42Q8IWZ5 723 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 ZNF610Q8N9Z0 462 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 SLC35B2Q8TB61 432 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 KCNJ9Q92806 393 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 ALKBH8Q96BT7 664 aaKnown RBP12.41□□□□□ -0.42
PFDN6-204ENST00000395131 CSF3RQ99062 836 aa12.41□□□□□ -0.42
PFDN6-204ENST00000395131 C12orf65Q9H3J6 166 aaKnown RBP12.41□□□□□ -0.42
PFDN6-204ENST00000395131 ETNK1Q9HBU6 452 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms