RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 RAB8AP61006 207 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 POU6F2P78424 691 aaPredicted RBP16.4■□□□□ 0.22
SIN3A-203ENST00000394949 MRPS10P82664 201 aaKnown RBP16.4■□□□□ 0.22
SIN3A-203ENST00000394949 UAP1L1Q3KQV9 507 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 AMZ1Q400G9 498 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ZNF648Q5T619 568 aaPredicted RBP16.4■□□□□ 0.22
SIN3A-203ENST00000394949 GPRIN1Q7Z2K8 1008 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 KCT2Q8NC54 265 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 OR4K14Q8NGD5 310 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ELMOD3Q96FG2 381 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 TMEM19Q96HH6 336 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 C17orf62Q9BQA9 187 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
SIN3A-203ENST00000394949 A0A0G2JMP0 313 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ANHXE9PGG2 379 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 BLOC1S5-TXNDC5H3BN57 136 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ACVR1BP36896 505 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ALG1LQ6GMV1 187 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 FAM217AQ8IXS0 508 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 OR4M2Q8NGB6 313 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 TRMT10AQ8TBZ6 339 aaKnown RBP16.4■□□□□ 0.22
SIN3A-203ENST00000394949 HCAR2Q8TDS4 363 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 ZNF436Q9C0F3 470 aaPredicted RBP16.4■□□□□ 0.22
SIN3A-203ENST00000394949 TEX51A0A1B0GUA7 166 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 TRAPPC13A5PLN9 417 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 TFP02787 698 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 BMP4P12644 408 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 HOXB2P14652 356 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 GK2Q14410 553 aaPredicted RBP16.4■□□□□ 0.22
SIN3A-203ENST00000394949 UPP1Q16831 310 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 CLEC14AQ86T13 490 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 GALNT11Q8NCW6 608 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 C7orf57Q8NEG2 295 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 HUS1BQ8NHY5 278 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 TMEM41AQ96HV5 264 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 INPP5KQ9BT40 448 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 PCDHB16Q9NRJ7 776 aa16.4■□□□□ 0.22
SIN3A-203ENST00000394949 DNAJB6O75190 326 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 CTSOP43234 321 aaPredicted RBP16.39■□□□□ 0.21
SIN3A-203ENST00000394949 ZNF789Q5FWF6 425 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 SFRP4Q6FHJ7 346 aaPredicted RBP16.39■□□□□ 0.21
SIN3A-203ENST00000394949 MAMDC4Q6UXC1 1216 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 ANKK1Q8NFD2 765 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 MZB1Q8WU39 189 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 LRIG1Q96JA1 1093 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 CNN2Q99439 309 aaKnown RBP16.39■□□□□ 0.21
SIN3A-203ENST00000394949 SLC12A9Q9BXP2 914 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 A3GALT2U3KPV4 340 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 GXYLT2A0PJZ3 443 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 C1orf226A1L170 272 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 ZNF705EA8MWA4 302 aaPredicted RBP16.39■□□□□ 0.21
SIN3A-203ENST00000394949 C9J4A7 227 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 SMAD9O15198 467 aaKnown RBP16.39■□□□□ 0.21
SIN3A-203ENST00000394949 AK1P00568 194 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 RAB40BQ12829 278 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 ATAD3CQ5T2N8 411 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 METAP1DQ6UB28 335 aaPredicted RBP16.39■□□□□ 0.21
SIN3A-203ENST00000394949 KDELC1Q6UW63 502 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 Q6ZVL8 140 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 GALNT10Q86SR1 603 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 OR52P1PQ8NH57 321 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 TEX10Q9NXF1 929 aaPredicted RBP16.39■□□□□ 0.21
SIN3A-203ENST00000394949 KCNIP3Q9Y2W7 256 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 MYO9BQ13459 2157 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 ZNF726A6NNF4 738 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 NPIPA5E9PKD4 350 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 SEC14L2O76054 403 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 LACC1Q8IV20 430 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 NUP43Q8NFH3 380 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 OR6N2Q8NGY6 317 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 SLC7A13Q8TCU3 470 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 CD200R1Q8TD46 325 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 C7orf34Q96L11 122 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 POLDIP3Q9BY77 421 aaKnown RBP16.39■□□□□ 0.21
SIN3A-203ENST00000394949 ATG5Q9H1Y0 275 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 SLC2A4RGQ9NR83 387 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 NDUFAF4Q9P032 175 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 NPIPA1Q9UND3 350 aa16.39■□□□□ 0.21
SIN3A-203ENST00000394949 SMIM18P0DKX4 95 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 ECHDC3Q96DC8 303 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 ACSL5Q9ULC5 683 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 C1orf196B1AJZ1 125 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 HSPA12AO43301 675 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 GPR37L1O60883 481 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 GSRP00390 522 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 SHMT2P34897 504 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 ARRB1P49407 418 aaPredicted RBP16.38■□□□□ 0.21
SIN3A-203ENST00000394949 RGS19P49795 217 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 OR9Q2Q8NGE9 314 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 GLYATL1Q969I3 302 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 C3orf30Q96M34 536 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 GPR143P51810 404 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 MLLT11Q13015 90 aaPredicted RBP16.38■□□□□ 0.21
SIN3A-203ENST00000394949 INAVAQ3KP66 663 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 GRHL2Q6ISB3 625 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 GTPBP8Q8N3Z3 284 aaPredicted RBP16.38■□□□□ 0.21
SIN3A-203ENST00000394949 ZSCAN1Q8NBB4 408 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 BRF2Q9HAW0 419 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 ARNT2Q9HBZ2 717 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms