RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 NDUFA6P56556 154 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 SF3A2Q15428 464 aaKnown RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 ZNF610Q8N9Z0 462 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 QRSL1Q9H0R6 528 aaKnown RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 SLC32A1Q9H598 525 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 B4GALT7Q9UBV7 327 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 GJE1A6NN92 205 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 NUPL2O15504 423 aaKnown RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 ZNF780AO75290 641 aaPredicted RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 GPR143P51810 404 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 FMO1Q01740 532 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 FLYWCH1Q4VC44 716 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 OR10K2Q6IF99 312 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 FOXR2Q6PJQ5 311 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 TMPRSS9Q7Z410 1059 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 TLCD1Q96CP7 247 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 C10orf90Q96M02 699 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 TGOLN2O43493 480 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 ALDOBP05062 364 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 SLC1A3P43003 542 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 FAM162BQ5T6X4 162 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 OR6K2Q8NGY2 324 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 FBXL20Q96IG2 436 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 ISCA1Q9BUE6 129 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 RYDENQ9NUL5 291 aaKnown RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 CACNG2Q9Y698 323 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 LYRM1O43325 122 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 RFTN1Q14699 578 aaPredicted RBP12.86□□□□□ -0.35
USP49-203ENST00000394253 MICU1Q9BPX6 476 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 OR2AG1Q9H205 316 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 KMT2EQ8IZD2 1858 aa12.86□□□□□ -0.35
USP49-203ENST00000394253 SLC17A1Q14916 467 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 ZNF546Q86UE3 836 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 ACSL6Q9UKU0 697 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 CPQQ9Y646 472 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 DOCK6Q96HP0 2047 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 MSCO60682 206 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 EFNA1P20827 205 aaPredicted RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 ELK4P28324 431 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 NR0B1P51843 470 aaKnown RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 STEAP4Q687X5 459 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 CFAP52Q8N1V2 620 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 PIP5K1AQ99755 562 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 DZANK1Q9NVP4 752 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 NLKQ9UBE8 527 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 SLITRK3O94933 977 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 TMEM150AQ86TG1 271 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 SDC3O75056 442 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 CDKN2BP42772 138 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 GALNT1Q10472 559 aaPredicted RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 FAM124AQ86V42 546 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 ACBD7Q8N6N7 88 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 SIDT2Q8NBJ9 832 aaKnown RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 OR4K15Q8NH41 348 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 PLD4Q96BZ4 506 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 SMIM12Q96EX1 92 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 ZNF251Q9BRH9 671 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 FCER1GP30273 86 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 PLA2G7Q13093 441 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 HEPHL1Q6MZM0 1159 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 C1orf87Q8N0U7 546 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 KLHDC1Q8N7A1 406 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 IL21RQ9HBE5 538 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 B3GNT3Q9Y2A9 372 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 YTHDF2Q9Y5A9 579 aaKnown RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 A6NLC8 198 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 HLA-AP01891 365 aaKnown RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 HNF1BP35680 557 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 CCINQ13939 588 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 DUSP7Q16829 419 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 PSRC1Q6PGN9 363 aaPredicted RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 ASRGL1Q7L266 308 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 ZNF596Q8TC21 504 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 TBC1D20Q96BZ9 403 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 CASD1Q96PB1 797 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 TMEM181Q9P2C4 612 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 DEC1Q9P2X7 70 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 UGT2A1Q9Y4X1 527 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 SLIT1O75093 1534 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 MT-CYBP00156 380 aaPredicted RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 NFYAP23511 347 aaPredicted RBP12.85□□□□□ -0.35
USP49-203ENST00000394253 DLX5P56178 289 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 HSD17B7P56937 341 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 TAS2R46P59540 309 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 CNTN2Q02246 1040 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 PTP4A2Q12974 167 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 YIF1BQ5BJH7 314 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 GINS3Q9BRX5 216 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 MAGEH1Q9H213 219 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 RIOX1Q9H6W3 641 aa12.85□□□□□ -0.35
USP49-203ENST00000394253 GABRDO14764 452 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 PMM2O15305 246 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 MRPL3P09001 348 aaKnown RBP12.84□□□□□ -0.35
USP49-203ENST00000394253 RHOQP17081 205 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 MMP8P22894 467 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 IL4RP24394 825 aa12.84□□□□□ -0.35
USP49-203ENST00000394253 MRPS34P82930 218 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms