RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 KRT78Q8N1N4 520 aa17.27■□□□□ 0.36
SNCB-202ENST00000393693 ZFP62Q8NB50 900 aaPredicted RBP17.27■□□□□ 0.36
SNCB-202ENST00000393693 AIF1LQ9BQI0 150 aa17.27■□□□□ 0.36
SNCB-202ENST00000393693 ZNF385DQ9H6B1 395 aa17.27■□□□□ 0.36
SNCB-202ENST00000393693 CLK4Q9HAZ1 481 aaKnown RBP17.27■□□□□ 0.36
SNCB-202ENST00000393693 PRM3Q9NNZ6 103 aa17.27■□□□□ 0.36
SNCB-202ENST00000393693 DEPPQ9NTK1 212 aa17.27■□□□□ 0.36
SNCB-202ENST00000393693 KCMF1Q9P0J7 381 aa17.27■□□□□ 0.36
SNCB-202ENST00000393693 PTGDR2Q9Y5Y4 395 aa17.27■□□□□ 0.36
SNCB-202ENST00000393693 URADA6NGE7 173 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 PDYNP01213 254 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 PIK3R1P27986 724 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 GPR143P51810 404 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 HNRNPFP52597 415 aaKnown RBP17.26■□□□□ 0.35
SNCB-202ENST00000393693 BTN3A2P78410 334 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 EMX2Q04743 252 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 TFF3Q07654 80 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 TMEM211Q6ICI0 200 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 Q6ZSR9 355 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 TREML1Q86YW5 311 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 FNDC5Q8NAU1 212 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 TMEM52Q8NDY8 209 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 TRPV3Q8NET8 790 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 LILRB4Q8NHJ6 448 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 RP9Q8TA86 221 aaKnown RBP17.26■□□□□ 0.35
SNCB-202ENST00000393693 ASB5Q8WWX0 329 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 NCLNQ969V3 563 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 PITHD1Q9GZP4 211 aaPredicted RBP17.26■□□□□ 0.35
SNCB-202ENST00000393693 PLSCR2Q9NRY7 297 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNCB-202ENST00000393693 NMRK1Q9NWW6 199 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 ADGRE2Q9UHX3 823 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 EIF3LQ9Y262 564 aaKnown RBP17.26■□□□□ 0.35
SNCB-202ENST00000393693 CLDN16Q9Y5I7 305 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 MED13LQ71F56 2210 aa17.26■□□□□ 0.35
SNCB-202ENST00000393693 RSL1D1O76021 490 aaKnown RBP17.25■□□□□ 0.35
SNCB-202ENST00000393693 TOXO94900 526 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 T-ENOLP0DO92 83 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 NCALDP61601 193 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 AP5B1Q2VPB7 878 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 GLIPR1L2Q4G1C9 344 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 C6orf136Q5SQH8 315 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 SCUBE1Q8IWY4 988 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 MIER2Q8N344 545 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 RND1Q92730 232 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 KLHL29Q96CT2 875 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 VMP1Q96GC9 406 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 TP63Q9H3D4 680 aaPredicted RBP17.25■□□□□ 0.35
SNCB-202ENST00000393693 BRF2Q9HAW0 419 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 TMEM45AQ9NWC5 275 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 MMACHCQ9Y4U1 282 aa17.25■□□□□ 0.35
SNCB-202ENST00000393693 MYOCOSA0A1B0GUC4 107 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 CFAP73A6NFT4 308 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 TMEM200CA6NKL6 621 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 FAM166BA8MTA8 275 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 LSM1O15116 133 aaKnown RBP17.24■□□□□ 0.35
SNCB-202ENST00000393693 PRAMEF4O60810 478 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 DNAJC8O75937 253 aaPredicted RBP17.24■□□□□ 0.35
SNCB-202ENST00000393693 PCNAP12004 261 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 COX4I1P13073 169 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 MAPK1P28482 360 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 SERPINB1P30740 379 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 CHRNB4P30926 498 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 MRPL19P49406 292 aaKnown RBP17.24■□□□□ 0.35
SNCB-202ENST00000393693 SSR4P51571 173 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 NUP107P57740 925 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 MXRA7P84157 204 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 PMPCAQ10713 525 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 CYLC2Q14093 348 aaPredicted RBP17.24■□□□□ 0.35
SNCB-202ENST00000393693 SLBPQ14493 270 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNCB-202ENST00000393693 PRAMEF9Q5VWM5 478 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 ARHGAP11AQ6P4F7 1023 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNCB-202ENST00000393693 LAS2Q8IYD9 372 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 FAM9CQ8IZT9 166 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 OR2T11Q8NH01 316 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 CMTM7Q96FZ5 175 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 METTL2AQ96IZ6 378 aaKnown RBP17.24■□□□□ 0.35
SNCB-202ENST00000393693 MARK4Q96L34 752 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 NT5DC2Q9H857 520 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 LRTM1Q9HBL6 345 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 TIMMDC1Q9NPL8 285 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 PRTFDC1Q9NRG1 225 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 AIG1Q9NVV5 245 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 C1orf109Q9NX04 203 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 NOP53Q9NZM5 478 aaKnown RBP17.24■□□□□ 0.35
SNCB-202ENST00000393693 PPIEQ9UNP9 301 aaKnown RBP17.24■□□□□ 0.35
SNCB-202ENST00000393693 ERVK-11Q9UQG0 969 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 TSC22D4Q9Y3Q8 395 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 NF1P21359 2839 aa17.24■□□□□ 0.35
SNCB-202ENST00000393693 A0A0G2JMM0 328 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 A0A1W2PPB8 328 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 A0A1W2PRS3 328 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 KIR3DP1A8MWS1 328 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 NPIPA2E9PIF3 369 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 NPIPB8E9PQR5 432 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 NPIPA3F8WFD2 350 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 G3V3Y1 287 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 SEC22BO75396 215 aa17.23■□□□□ 0.35
SNCB-202ENST00000393693 OR2J2O76002 312 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms