RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CAPNS1P04632 268 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 DRD5P21918 477 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 RBMXP38159 391 aaKnown RBP18.77■□□□□ 0.6
SHANK1-203ENST00000391813 BDKRB1P46663 353 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 BLOC1S1P78537 153 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 CREB3L2Q70SY1 520 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 NSMAFQ92636 917 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 SGTBQ96EQ0 304 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 FBXL3Q9UKT7 428 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 ARPC5O15511 151 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 PKLRP30613 574 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 ACTBP60709 375 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 ACTG1P63261 375 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 TAGLNQ01995 201 aaKnown RBP18.77■□□□□ 0.6
SHANK1-203ENST00000391813 POU4F3Q15319 338 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 ZFP41Q8N8Y5 198 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 GPR150Q8NGU9 434 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 TAC3Q9UHF0 121 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 GJA1P17302 382 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 VIPR1P32241 457 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 ART1P52961 327 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 RAB6CQ53S08 254 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF776Q68DI1 518 aaPredicted RBP18.77■□□□□ 0.6
SHANK1-203ENST00000391813 OR7G2Q8NG99 324 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 OR2AJ1Q8NGZ0 328 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 OR8S1Q8NH09 359 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 MRI1Q9BV20 369 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 RAB6CQ9H0N0 254 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 SARDHQ9UL12 918 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF878C9JN71 531 aa18.77■□□□□ 0.59
SHANK1-203ENST00000391813 VNN2O95498 520 aa18.77■□□□□ 0.59
SHANK1-203ENST00000391813 BMP1P13497 986 aa18.77■□□□□ 0.59
SHANK1-203ENST00000391813 PCGF2P35227 344 aa18.77■□□□□ 0.59
SHANK1-203ENST00000391813 MRPS10P82664 201 aaKnown RBP18.77■□□□□ 0.59
SHANK1-203ENST00000391813 SEMG2Q02383 582 aa18.77■□□□□ 0.59
SHANK1-203ENST00000391813 MFSD8Q8NHS3 518 aa18.77■□□□□ 0.59
SHANK1-203ENST00000391813 LMLNQ96KR4 655 aa18.77■□□□□ 0.59
SHANK1-203ENST00000391813 THAP7Q9BT49 309 aaPredicted RBP18.77■□□□□ 0.59
SHANK1-203ENST00000391813 UNKLQ9H9P5 680 aaKnown RBP18.77■□□□□ 0.59
SHANK1-203ENST00000391813 GSKIPQ9P0R6 139 aa18.77■□□□□ 0.59
SHANK1-203ENST00000391813 PSMD9O00233 223 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 KCNQ1P51787 676 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 MLLT10P55197 1068 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 FXYD6P3P58550 94 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 RING1Q06587 406 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 ENPP2Q13822 863 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 RAB41Q5JT25 222 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 OR2L8Q8NGY9 312 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 OR56A3Q8NH54 315 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 GPR62Q9BZJ7 368 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 NMNAT1Q9HAN9 279 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 ETFAP13804 333 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 C21orf33P30042 268 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 FRKP42685 505 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 SSX6Q7RTT6 188 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 FAM129CQ86XR2 697 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 OR2S2Q9NQN1 319 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 CD300AQ9UGN4 299 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 KLHL21Q9UJP4 597 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 RHOP08100 348 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 C1GALT1C1LP0DN25 315 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 CD6P30203 668 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 MLLT11Q13015 90 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 UNC5DQ6UXZ4 953 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 CLEC14AQ86T13 490 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 AVL9Q8NBF6 648 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 TRMT10AQ8TBZ6 339 aaKnown RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 THEM6Q8WUY1 208 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 RPL3LQ92901 407 aaKnown RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 OCEL1Q9H607 264 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 ZNF334Q9HCZ1 680 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 GJD2Q9UKL4 321 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 MYH1P12882 1939 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 CTSAP10619 480 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 IL4RP24394 825 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 FOXA1P55317 472 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 TOMM20Q15388 145 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 SYT6Q5T7P8 510 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 LETMD1Q6P1Q0 360 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 WASH2PQ6VEQ5 465 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 LYSMD2Q8IV50 215 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 ZNF527Q8NB42 609 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 PGAP3Q96FM1 320 aaPredicted RBP18.76■□□□□ 0.59
SHANK1-203ENST00000391813 LAMP5Q9UJQ1 280 aa18.76■□□□□ 0.59
SHANK1-203ENST00000391813 LOC105369274A0A096LPK9 316 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 TRBV2A0A0J9YWF9 115 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 RGS19P49795 217 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 RAB33AQ14088 237 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 PSAPL1Q6NUJ1 521 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 TMEM205Q6UW68 189 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 OR4N4Q8N0Y3 316 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 UGT2A1Q9Y4X1 527 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 SLC31A1O15431 190 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 ATP5A1P25705 553 aaKnown RBP18.75■□□□□ 0.59
SHANK1-203ENST00000391813 MMP12P39900 470 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 SF3B4Q15427 424 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHANK1-203ENST00000391813 RGNQ15493 299 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 GALNT10Q86SR1 603 aa18.75■□□□□ 0.59
SHANK1-203ENST00000391813 TFGQ92734 400 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-203ENST00000391813 FN3KQ9H479 309 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms