RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 SRPX2O60687 465 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZNF253O75346 499 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 SRSF10O75494 262 aaKnown RBP3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 RHBDL1O75783 438 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 BCAS2O75934 225 aaPredicted RBP3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 OAS1P00973 400 aaKnown RBP3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 SLC4A1P02730 911 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 AHCYP23526 432 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 TMOD1P28289 359 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 CSRP3P50461 194 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 ARHGDIAP52565 204 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 CASP9P55211 416 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 RAG2P55895 527 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 MIER3Q7Z3K6 550 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 SPAG16Q8N0X2 631 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 LRRC17Q8N6Y2 441 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 TMEM45BQ96B21 275 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 CPXM1Q96SM3 734 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 COQ7Q99807 217 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 GPR174Q9BXC1 333 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZBP1Q9H171 429 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 SYTL2Q9HCH5 934 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 ABCD2Q9UBJ2 740 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 MLXQ9UH92 298 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 IL19Q9UHD0 177 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZNF175Q9Y473 711 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 FAM205AQ6ZU69 1335 aa3.4□□□□□ -1.87
SNORA40.2-201ENST00000390847 NPC1L1Q9UHC9 1359 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 A0A0U1RRA0 63 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 TMEM89A2RUT3 159 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 ARHGAP42A6NI28 874 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 SLC9B1P1A6NJY1 282 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 E2F3O00716 465 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 RANBP6O60518 1105 aaKnown RBP3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 MT-ND3P03897 115 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 YBEYP58557 167 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 NAAAQ02083 359 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 BNIP1Q12981 228 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 RUNX3Q13761 415 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 PPP1R3AQ16821 1122 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 TIMM50Q3ZCQ8 353 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 CCDC40Q4G0X9 1142 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 ATAD3CQ5T2N8 411 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 SEL1L2Q5TEA6 688 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 TAF3Q5VWG9 929 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 LIPKQ5VXJ0 399 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 MFSD7Q6UXD7 560 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 TAF8Q7Z7C8 310 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 YRDCQ86U90 279 aaKnown RBP3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 NAXDQ8IW45 347 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 GPD1LQ8N335 351 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 LINC00612Q8N6U2 182 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 OR52E1Q8NGJ3 308 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 OR52J3Q8NH60 311 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 CRYGNQ8WXF5 182 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 PHYHIPQ92561 330 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 P3H4Q92791 437 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 FAM173AQ9BQD7 235 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 CBWD1Q9BRT8 395 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 XPO4Q9C0E2 1151 aaKnown RBP3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 SIRPDQ9H106 197 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 ESM1Q9NQ30 184 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 SLC7A10Q9NS82 523 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 KCNN3Q9UGI6 736 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 RSPH14Q9UHP6 348 aa3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZNF107Q9UII5 783 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.2-201ENST00000390847 NPIPA5A0A0B4J1W7 369 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZSCAN5CA6NGD5 496 aaPredicted RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 NPIPA5E9PKD4 350 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 PHOX2AO14813 284 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 HTATSF1O43719 755 aaKnown RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 PDE5AO76074 875 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 THY1P04216 161 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 SNRPCP09234 159 aaKnown RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 CCDC192P0DO97 292 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 STMN1P16949 149 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 SFNP31947 248 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 SAA4P35542 130 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 VCPP55072 806 aaKnown RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 NOP14P78316 857 aaKnown RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 WASHC5Q12768 1159 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 SLC10A1Q14973 349 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 Q1RN00 199 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 HERC4Q5GLZ8 1057 aaPredicted RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 VITQ6UXI7 678 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 ADAMTSL5Q6ZMM2 481 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 WDR88Q6ZMY6 472 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 DPY19L2P2Q6ZN68 376 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZNF600Q6ZNG1 722 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 STOX1Q6ZVD7 989 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZPLD1Q8TCW7 415 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 LHX4Q969G2 390 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 CCDC47Q96A33 483 aaKnown RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 NSMCE2Q96MF7 247 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 APOOQ9BUR5 198 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 FTHL17Q9BXU8 183 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 FAM124BQ9H5Z6 455 aaPredicted RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 TIGARQ9NQ88 270 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 ANO10Q9NW15 660 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms