RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 ATP6V1HQ9UI12 483 aa2.47□□□□□ -2.01
TRAJ40-201ENST00000390497 FOXJ3Q9UPW0 622 aa2.47□□□□□ -2.01
TRAJ40-201ENST00000390497 MRPS7Q9Y2R9 242 aaKnown RBP2.47□□□□□ -2.01
TRAJ40-201ENST00000390497 KLHDC2Q9Y2U9 406 aa2.47□□□□□ -2.01
TRAJ40-201ENST00000390497 LRP12Q9Y561 859 aa2.47□□□□□ -2.01
TRAJ40-201ENST00000390497 GRIN2DO15399 1336 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 KIF16BQ96L93 1317 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 TRBV5-4A0A0C4DH59 114 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 A0A0J9YVX5 310 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 A0A1B0GUL7 405 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 WASHC1A8K0Z3 465 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 ARHGEF33A8MVX0 844 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 PDLIM1O00151 329 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 PDHXO00330 501 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 FRAT2O75474 233 aaPredicted RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 RHOBTB1O94844 696 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 NUDT14O95848 222 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 HPRP00739 348 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 IGHG1P01857 330 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CFC1BP0CG36 223 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CFC1P0CG37 223 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 PSMA2P25787 234 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 OTX2P32243 289 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CAPGP40121 348 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 ID1P41134 155 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 TRPC1P48995 793 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CRIP2P52943 208 aaPredicted RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 OSTNP61366 133 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 MRPS6P82932 125 aaKnown RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 FKBP3Q00688 224 aaKnown RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 NAAAQ02083 359 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 ELAVL2Q12926 359 aaKnown RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CALCOCO2Q13137 446 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 NFATC2Q13469 925 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 ZNF146Q15072 292 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 LRRC23Q53EV4 343 aaPredicted RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 TCHHL1Q5QJ38 904 aaPredicted RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 DCAF12Q5T6F0 453 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 TAF3Q5VWG9 929 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 GALNT17Q6IS24 598 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 NIPAL3Q6P499 406 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 LEG1Q6P5S2 330 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 GDPGP1Q6ZNW5 385 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 STOX1Q6ZVD7 989 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 USP43Q70EL4 1123 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 MOB2Q70IA6 237 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 NET1Q7Z628 596 aaPredicted RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 LUZP1Q86V48 1076 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 PHC2Q8IXK0 858 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CENPSQ8N2Z9 138 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 FADS6Q8N9I5 356 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 STKLD1Q8NE28 680 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CHDHQ8NE62 594 aaPredicted RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 FBXO30Q8TB52 745 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 NPRL2Q8WTW4 380 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 SLC25A36Q96CQ1 311 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 TRIM44Q96DX7 344 aaPredicted RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 SLC45A3Q96JT2 553 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 POM121L2Q96KW2 1035 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 VSTM2LQ96N03 204 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 AGAP3Q96P47 875 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 ATF6BQ99941 703 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 HSD17B14Q9BPX1 270 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 MCRIP2Q9BUT9 160 aaKnown RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 GPR174Q9BXC1 333 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 MRPL13Q9BYD1 178 aaKnown RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 ALG9Q9H6U8 611 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 ACTR8Q9H981 624 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CENPMQ9NSP4 180 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 GDAP2Q9NXN4 497 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 AATFQ9NY61 560 aaKnown RBP eCLIP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 EXTL2Q9UBQ6 330 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 SEC14L4Q9UDX3 406 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 CACNG5Q9UF02 275 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 PURGQ9UJV8 347 aaKnown RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 FZR1Q9UM11 496 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 MGAT4AQ9UM21 535 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 RNF6Q9Y252 685 aa2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 EIF3LQ9Y262 564 aaKnown RBP2.46□□□□□ -2.02
TRAJ40-201ENST00000390497 TTC26A0AVF1 554 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 ZNF724A8MTY0 619 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 LINC01565O15544 149 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 ADAM12O43184 909 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 DCXO43602 365 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 IDH3BO43837 385 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 TYROBPO43914 113 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 DUSP11O75319 330 aaKnown RBP2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 ZNF821O75541 412 aaPredicted RBP2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 OR4F21O95013 312 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 ANP32DO95626 131 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 IGSF6O95976 241 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 CALCAP01258 141 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 PCCBP05166 539 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 ANXA4P09525 319 aaPredicted RBP2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 HOXB7P09629 217 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 ZSCAN5DPP0CG00 497 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 HSD17B1P14061 328 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 FOSL2P15408 326 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 CD1DP15813 335 aa2.45□□□□□ -2.02
TRAJ40-201ENST00000390497 H2AFXP16104 143 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms