RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 RRM2P31350 389 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 HTR2BP41595 481 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 CDK5R2Q13319 367 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 TP53BP2Q13625 1128 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 SMN1Q16637 294 aaKnown RBP13.47□□□□□ -0.25
CLCN4-201ENST00000380829 SYT16Q17RD7 645 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 ZNF630Q2M218 657 aaPredicted RBP13.47□□□□□ -0.25
CLCN4-201ENST00000380829 RPS26P11Q5JNZ5 115 aaPredicted RBP13.47□□□□□ -0.25
CLCN4-201ENST00000380829 TJAP1Q5JTD0 557 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 ZNF691Q5VV52 312 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 SAXO2Q658L1 398 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 ZNF544Q6NX49 715 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 ABHD17CQ6PCB6 329 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 B3GNT8Q7Z7M8 397 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 NRROSQ86YC3 692 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 SFTPA2Q8IWL1 248 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 SLC22A18ASQ8N1D0 253 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 ACOT4Q8N9L9 421 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 CHAC2Q8WUX2 184 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 RAB8BQ92930 207 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 NEURL3Q96EH8 262 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 ZBED6CLQ96FA7 236 aaPredicted RBP13.47□□□□□ -0.25
CLCN4-201ENST00000380829 DHRS9Q9BPW9 319 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 BCL7BQ9BQE9 202 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 GABARAPL1Q9H0R8 117 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 TCEAL2Q9H3H9 227 aaPredicted RBP13.47□□□□□ -0.25
CLCN4-201ENST00000380829 NEUROD4Q9HD90 331 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 PRDM7Q9NQW5 492 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 NDUFAF4Q9P032 175 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 APOBEC3BQ9UH17 382 aaKnown RBP13.47□□□□□ -0.25
CLCN4-201ENST00000380829 KLF15Q9UIH9 416 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 PCOLCE2Q9UKZ9 415 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 RAB23Q9ULC3 237 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 ATG4BQ9Y4P1 393 aa13.47□□□□□ -0.25
CLCN4-201ENST00000380829 A6NCN8 305 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 PRAMEF25A6NGN4 478 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 TNFRSF10CO14798 259 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 ZW10O43264 779 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 LCKP06239 509 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 IGHV4-34P06331 123 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 ALPPL2P10696 532 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 CERS1P27544 350 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 NDUFS1P28331 727 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 AHRP35869 848 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 TGFBR2P37173 567 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 FRKP42685 505 aaPredicted RBP13.46□□□□□ -0.25
CLCN4-201ENST00000380829 SIM2Q14190 667 aaPredicted RBP13.46□□□□□ -0.25
CLCN4-201ENST00000380829 SLC9A5Q14940 896 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 PRR23CQ6ZRP0 262 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 PRSS48Q7RTY5 328 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 C6orf120Q7Z4R8 191 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 TBC1D19Q8N5T2 526 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 SIMC1Q8NDZ2 872 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 OR10G6Q8NH81 332 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 KCNC2Q96PR1 638 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 BEX2Q9BXY8 128 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 KIF17Q9P2E2 1029 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 ANGPT4Q9Y264 503 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 PADI2Q9Y2J8 665 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 ZNF451Q9Y4E5 1061 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 SPEF1Q9Y4P9 236 aa13.46□□□□□ -0.25
CLCN4-201ENST00000380829 METTL15A6NJ78 407 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 PGRMC2O15173 223 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ERAL1O75616 437 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 BCHEP06276 602 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ATP5A1P25705 553 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 TOP3AQ13472 1001 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ZNF750Q32MQ0 723 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 KDM4DQ6B0I6 523 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 CCDC28AQ8IWP9 274 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ATG16L2Q8NAA4 619 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 MFSD9Q8NBP5 474 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 KCT2Q8NC54 265 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 OR2L5Q8NG80 312 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 OR5H6Q8NGV6 325 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 TOE1Q96GM8 510 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 NEDD4LQ96PU5 975 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 GLIPR2Q9H4G4 154 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 RNF167Q9H6Y7 350 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 RPRD1BQ9NQG5 326 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 USP36Q9P275 1121 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 SNX7Q9UNH6 387 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 FANCMQ8IYD8 2048 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 ARHGEF17Q96PE2 2063 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 A0A1W2PR48 441 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 BCKDKO14874 412 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 MBTPS2O43462 519 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 PRAMEF10O60809 474 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 POLR2CP19387 275 aaPredicted RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 GPC1P35052 558 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 CCT3P49368 545 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 CLK1P49759 484 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 PCBP3P57721 371 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 YPEL5P62699 121 aa13.45□□□□□ -0.26
CLCN4-201ENST00000380829 TRA2BP62995 288 aaKnown RBP13.45□□□□□ -0.26
CLCN4-201ENST00000380829 SNRPNP63162 240 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms