RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 TIMP4Q99727 224 aa17.95■□□□□ 0.46
CCDC107-202ENST00000378406 DOHHQ9BU89 302 aa17.95■□□□□ 0.46
CCDC107-202ENST00000378406 PLEKHF2Q9H8W4 249 aa17.95■□□□□ 0.46
CCDC107-202ENST00000378406 SSU72Q9NP77 194 aaKnown RBP17.95■□□□□ 0.46
CCDC107-202ENST00000378406 PLLPQ9Y342 182 aa17.95■□□□□ 0.46
CCDC107-202ENST00000378406 A0A1B0GTL3 188 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 TUBAL3A6NHL2 446 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 DYRK3O43781 588 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 TYROBPO43914 113 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 PLIN3O60664 434 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 TRIM3O75382 744 aaPredicted RBP17.94■□□□□ 0.46
CCDC107-202ENST00000378406 TGFB1P01137 390 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 MTHFD2P13995 350 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 GDF1P27539 372 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 SERPINB3P29508 390 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 HOXC12P31275 282 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 SSR2P43308 183 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 PLIN5Q00G26 463 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 IRF8Q02556 426 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 KEAP1Q14145 624 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 TBCCQ15814 346 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 HIST2H2ACQ16777 129 aaPredicted RBP17.94■□□□□ 0.46
CCDC107-202ENST00000378406 PFKFB4Q16877 469 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 FBXW10Q5XX13 1052 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 HIST2H2AA3Q6FI13 130 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 Q71RC1 249 aaPredicted RBP17.94■□□□□ 0.46
CCDC107-202ENST00000378406 PDPRQ8NCN5 879 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 FAM111AQ96PZ2 611 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 GAL3ST4Q96RP7 486 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 SORBS1Q9BX66 1292 aaKnown RBP17.94■□□□□ 0.46
CCDC107-202ENST00000378406 WWTR1Q9GZV5 400 aa17.94■□□□□ 0.46
CCDC107-202ENST00000378406 RPF2Q9H7B2 306 aaKnown RBP17.94■□□□□ 0.46
CCDC107-202ENST00000378406 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCDC107-202ENST00000378406 PTBP2Q9UKA9 531 aaKnown RBP17.94■□□□□ 0.46
CCDC107-202ENST00000378406 SAP18O00422 153 aaKnown RBP17.93■□□□□ 0.46
CCDC107-202ENST00000378406 IL2RAP01589 272 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 CASP2P42575 452 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 HERVK_113P63132 956 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 ERVK-8P63133 956 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 SLAMF1Q13291 335 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 BIKQ13323 160 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 NTRK2Q16620 822 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 NSUN5P2Q63ZY6 315 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 CHSY3Q70JA7 882 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 SLC29A4Q7RTT9 530 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 KRTAP1-3Q8IUG1 177 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 LAS2Q8IYD9 372 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 PTGR2Q8N8N7 351 aaPredicted RBP17.93■□□□□ 0.46
CCDC107-202ENST00000378406 LINC01560Q8TB33 94 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 C18orf12Q96KH6 178 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 ZNF597Q96LX8 424 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 ERVK-6Q9BXR3 956 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 PRDM14Q9GZV8 571 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 RYDENQ9NUL5 291 aaKnown RBP17.93■□□□□ 0.46
CCDC107-202ENST00000378406 MS4A12Q9NXJ0 267 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 SLC17A7Q9P2U7 560 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 TMCO1Q9UM00 188 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 ERVK-19Q9WJR5 959 aa17.93■□□□□ 0.46
CCDC107-202ENST00000378406 NSD1Q96L73 2696 aaPredicted RBP17.92■□□□□ 0.46
CCDC107-202ENST00000378406 ANKRD33BA6NCL7 494 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 HMGB1P1B2RPK0 211 aaPredicted RBP17.92■□□□□ 0.46
CCDC107-202ENST00000378406 CCNT2O60583 730 aaKnown RBP17.92■□□□□ 0.46
CCDC107-202ENST00000378406 PRKRAO75569 313 aaKnown RBP17.92■□□□□ 0.46
CCDC107-202ENST00000378406 MYL2P10916 166 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 PCNAP12004 261 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 ALOX15P16050 662 aaPredicted RBP17.92■□□□□ 0.46
CCDC107-202ENST00000378406 SLC37A1P57057 533 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 EBPQ15125 230 aaKnown RBP17.92■□□□□ 0.46
CCDC107-202ENST00000378406 SPRED3Q2MJR0 410 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 KHDRBS2Q5VWX1 349 aaKnown RBP17.92■□□□□ 0.46
CCDC107-202ENST00000378406 C18orf63Q68DL7 685 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 OR4C11Q6IEV9 310 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 RNF111Q6ZNA4 994 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 KIF18BQ86Y91 864 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 ST13P4Q8IZP2 240 aaPredicted RBP17.92■□□□□ 0.46
CCDC107-202ENST00000378406 TANKQ92844 425 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 PHF21BQ96EK2 531 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 HSPBAP1Q96EW2 488 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 OR51B5Q9H339 312 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 UBQLN3Q9H347 655 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 MID2Q9UJV3 735 aa17.92■□□□□ 0.46
CCDC107-202ENST00000378406 TMEM120BA0PK00 339 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 DLX3O60479 287 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 CLPSP04118 112 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 CPA3P15088 417 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 ATP5F1P24539 256 aaPredicted RBP17.91■□□□□ 0.46
CCDC107-202ENST00000378406 AGFG1P52594 562 aaKnown RBP17.91■□□□□ 0.46
CCDC107-202ENST00000378406 ALDH18A1P54886 795 aaKnown RBP17.91■□□□□ 0.46
CCDC107-202ENST00000378406 HNRNPH2P55795 449 aaKnown RBP17.91■□□□□ 0.46
CCDC107-202ENST00000378406 SORDQ00796 357 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 TNFRSF17Q02223 184 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 ZNF267Q14586 743 aaPredicted RBP17.91■□□□□ 0.46
CCDC107-202ENST00000378406 HSP90B2PQ58FF3 399 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 TBCELQ5QJ74 424 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 DEPDC1Q5TB30 811 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 FNDC7Q5VTL7 733 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 TMEM198Q66K66 360 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 BICRALQ6AI39 1079 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 VASNQ6EMK4 673 aa17.91■□□□□ 0.46
CCDC107-202ENST00000378406 MED27Q6P2C8 311 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms