RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 ZNF354AO60765 605 aaPredicted RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 ITGA10O75578 1167 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 NADKO95544 446 aaPredicted RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 MANFP55145 182 aaKnown RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 IRX1P78414 480 aaPredicted RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 EXOSC7Q15024 291 aaKnown RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 C6orf163Q5TEZ5 329 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 ZNF468Q5VIY5 522 aaPredicted RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 C16orf47Q6ZP98 133 aaPredicted RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 ZADH2Q8N4Q0 377 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 GLB1L3Q8NCI6 653 aaPredicted RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 OR52R1Q8NGF1 315 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 ZFP28Q8NHY6 868 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 THAP3Q8WTV1 239 aaPredicted RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 TP53INP1Q96A56 240 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 TRIM4Q9C037 500 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 ANKRA2Q9H9E1 313 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 SIRT3Q9NTG7 399 aaPredicted RBP18.43■□□□□ 0.54
DDR1-228ENST00000376575 PLA2G3Q9NZ20 509 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 DCTN4Q9UJW0 460 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 ERVK-11Q9UQG0 969 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 CFL2Q9Y281 166 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 DTX4Q9Y2E6 619 aa18.43■□□□□ 0.54
DDR1-228ENST00000376575 E9PBE3 544 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 RNASET2O00584 256 aaKnown RBP18.42■□□□□ 0.54
DDR1-228ENST00000376575 PRAMEF2O60811 474 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 OR2J2O76002 312 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 VIMP08670 466 aaKnown RBP18.42■□□□□ 0.54
DDR1-228ENST00000376575 GPX3P22352 226 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 MC3RP41968 323 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 TNFSF10P50591 281 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 TUBA3CQ13748 450 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 TUBA3EQ6PEY2 450 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 TMEM107Q6UX40 140 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 LYPD8Q6UX82 237 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 SLC29A4Q7RTT9 530 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 ZNF227Q86WZ6 799 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 SLC15A4Q8N697 577 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 OR5P2Q8WZ92 322 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 HOXB13Q92826 284 aaPredicted RBP18.42■□□□□ 0.54
DDR1-228ENST00000376575 THOC1Q96FV9 657 aaKnown RBP18.42■□□□□ 0.54
DDR1-228ENST00000376575 MARK4Q96L34 752 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 VSTM2LQ96N03 204 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 RASL10BQ96S79 203 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 LIN28AQ9H9Z2 209 aaKnown RBP18.42■□□□□ 0.54
DDR1-228ENST00000376575 PRODH2Q9UF12 536 aa18.42■□□□□ 0.54
DDR1-228ENST00000376575 RALYQ9UKM9 306 aaKnown RBP18.42■□□□□ 0.54
DDR1-228ENST00000376575 C2orf92A0A1B0GVN3 265 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 A0A1W2PRB8 838 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 OR5H15A6NDH6 313 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 WWP2O00308 870 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 FCHO1O14526 889 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 CD96P40200 585 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 KIR3DL1P43629 444 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 CDK9P50750 372 aaKnown RBP18.41■□□□□ 0.54
DDR1-228ENST00000376575 ATP4BP51164 291 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 KLRB1Q12918 225 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 HSPB3Q12988 150 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 SPANXN4Q5MJ08 99 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 PNPLA2Q96AD5 504 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 ZNF385DQ9H6B1 395 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 TMEM45AQ9NWC5 275 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 ABI3Q9P2A4 366 aa18.41■□□□□ 0.54
DDR1-228ENST00000376575 HEMK1Q9Y5R4 338 aaPredicted RBP18.41■□□□□ 0.54
DDR1-228ENST00000376575 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 DYTNA2CJ06 578 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 SLC22A3O75751 556 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 C1QL1O75973 258 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 NEURL1O76050 574 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 TROVE2P10155 538 aaKnown RBP eCLIP18.4■□□□□ 0.54
DDR1-228ENST00000376575 EFNA1P20827 205 aaPredicted RBP18.4■□□□□ 0.54
DDR1-228ENST00000376575 MAP3K8P41279 467 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 HLCSP50747 726 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 GYS2P54840 703 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 NME5P56597 212 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 ARG2P78540 354 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 RPS6KA2Q15349 733 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 PGS1Q32NB8 556 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 FAM174BQ3ZCQ3 159 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 NADK2Q4G0N4 442 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 EXOSC6Q5RKV6 272 aaKnown RBP18.4■□□□□ 0.54
DDR1-228ENST00000376575 METTL21CQ5VZV1 264 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 SLC6A19Q695T7 634 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 OR4F3Q6IEY1 312 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 GPALPP1Q8IXQ4 340 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 MIER2Q8N344 545 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 Q8NA96 180 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 MDS2Q8NDY4 140 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 CATSPER1Q8NEC5 780 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 GIMAP5Q96F15 307 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 CHMP6Q96FZ7 201 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 BTBD9Q96Q07 612 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 UTP23Q9BRU9 249 aaKnown RBP18.4■□□□□ 0.54
DDR1-228ENST00000376575 TAS2R9Q9NYW1 312 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 BCAP29Q9UHQ4 241 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 B3GNT3Q9Y2A9 372 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 GPR55Q9Y2T6 319 aaPredicted RBP18.4■□□□□ 0.54
DDR1-228ENST00000376575 PCDHGB6Q9Y5F9 930 aa18.4■□□□□ 0.54
DDR1-228ENST00000376575 COPG1Q9Y678 874 aaKnown RBP18.4■□□□□ 0.54
DDR1-228ENST00000376575 A0A0G2JND7 137 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms