RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 MMP28Q9H239 520 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 ACTL8Q9H568 366 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 IL20RAQ9UHF4 553 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 CTDSP2O14595 271 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 GABRA3P34903 492 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 DPP6P42658 865 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 FNTBP49356 437 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 HNRNPFP52597 415 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 RPS26P11Q5JNZ5 115 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF767PQ75MW2 155 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 OR5J2Q8NH18 312 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 RAB7BQ96AH8 199 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 TRIM43Q96BQ3 446 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 METTL2AQ96IZ6 378 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF471Q9BX82 626 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 METTL8Q9H825 291 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 FARSAQ9Y285 508 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 LRRTM2O43300 516 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 GJB3O75712 270 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 RGS9O75916 674 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 SOX30O94993 753 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 POLR2CP19387 275 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 CCR7P32248 378 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 GRK1Q15835 563 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 TMEM35AQ53FP2 167 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 MLIPQ5VWP3 458 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 PTRH1Q86Y79 214 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 NRMQ8IXM6 262 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 PNLDC1Q8NA58 520 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 OR56A3Q8NH54 315 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 COQ8AQ8NI60 647 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 SLC39A13Q96H72 371 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 POLDIP3Q9BY77 421 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 ARL6Q9H0F7 186 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 CXCL16Q9H2A7 254 aa10.98□□□□□ -0.65
PTCH1-203ENST00000375274 CNOT2Q9NZN8 540 aaKnown RBP10.98□□□□□ -0.65
PTCH1-203ENST00000375274 C13orf42A0A1B0GVH6 325 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 GXYLT2A0PJZ3 443 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CBLP22681 906 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 FSHRP23945 695 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 HRH2P25021 359 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 TACR1P25103 407 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 GRSF1Q12849 480 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 FGFBP1Q14512 234 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CTSL3PQ5NE16 218 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 PLBD1Q6P4A8 553 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 ULK3Q6PHR2 472 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CNIH2Q6PI25 160 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 Q6ZNX1 250 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 TMEM25Q86YD3 366 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 LRRC25Q8N386 305 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 DEDD2Q8WXF8 326 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 NEIL2Q969S2 332 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CIDECQ96AQ7 238 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 DPYSL5Q9BPU6 564 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 COPZ2Q9P299 210 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 MGAT4CQ9UBM8 478 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 AP1M2Q9Y6Q5 423 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 RHOP08100 348 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 RAB3BP20337 219 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 AK4P27144 223 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 GAS6Q14393 721 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 AAK1Q2M2I8 961 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 BCL2L15Q5TBC7 163 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 NDUFAF5Q5TEU4 345 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 ANKRD54Q6NXT1 300 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 ALKAL1Q6UXT8 129 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 TMPRSS12Q86WS5 348 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 OR8S1Q8NH09 359 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CASTOR1Q8WTX7 329 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 JPH3Q8WXH2 748 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 SCGB3A2Q96PL1 93 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 KLHL42Q9P2K6 505 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 ABCD2Q9UBJ2 740 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 PLEKHA6Q9Y2H5 1048 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 PKD1L3Q7Z443 1732 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 MEIOCA2RUB1 952 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 TNFRSF10BO14763 440 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 AHSA1O95433 338 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CSTAP01040 98 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 C6P13671 934 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 TNFSF8P32971 234 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 NRG3P56975 720 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 FAM189A2Q15884 450 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 C11orf91Q3C1V1 193 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CLLU1OSQ5K130 101 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 KIAA0319Q5VV43 1072 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 OR4C11Q6IEV9 310 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 ASPGQ86U10 573 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 NOXA1Q86UR1 476 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 FOXRED2Q8IWF2 684 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 PARP16Q8N5Y8 322 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 SYT14Q8NB59 555 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 ZC3H10Q96K80 434 aaKnown RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 SEC61A2Q9H9S3 476 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 B4DGG1 531 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CREBL2O60519 120 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 FMO6PO60774 539 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms