RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ACPTQ9BZG2 426 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 SPRTNQ9H040 489 aaPredicted RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 PAIP1Q9H074 479 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 ZDHHC6Q9H6R6 413 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 MAGIXQ9H6Y5 334 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ACTR8Q9H981 624 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 NTN4Q9HB63 628 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 PARVBQ9HBI1 364 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 WASH6PQ9NQA3 447 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DNAJC11Q9NVH1 559 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ARL15Q9NXU5 204 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 USE1Q9NZ43 259 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 VAPAQ9P0L0 249 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 TBC1D14Q9P2M4 693 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 DNAJB9Q9UBS3 223 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 SNX6Q9UNH7 406 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 PDE10AQ9Y233 779 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 FADS3Q9Y5Q0 445 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CEPT1Q9Y6K0 416 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 CUL9Q8IWT3 2517 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 TCF20Q9UGU0 1960 aaKnown RBP4.56□□□□□ -1.68
USP48-202ENST00000374730 PDE4DIPQ5VU43 2346 aa4.56□□□□□ -1.68
USP48-202ENST00000374730 ATG2AQ2TAZ0 1938 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ALPK3Q96L96 1907 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ELOVL7A1L3X0 281 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 AQP7P3A6NL99 342 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 C16orf96A6NNT2 1141 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 PSMD11O00231 422 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 AREL1O15033 823 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 CCL16O15467 120 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 SEC22BO75396 215 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 PSIP1O75475 530 aaKnown RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 PIAS2O75928 621 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 RECQL5O94762 991 aaPredicted RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 SLCO2B1O94956 709 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 INMTO95050 263 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 CXCL14O95715 111 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 PDYNP01213 254 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 FTH1P02794 183 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ALPLP05186 524 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 SRPRAP08240 638 aaKnown RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 GNAO1P09471 354 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ATP1B2P14415 290 aaPredicted RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 ETS2P15036 469 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 GJA1P17302 382 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 SDC1P18827 310 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 PTPN6P29350 595 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 HOXA9P31269 272 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 S100A3P33764 101 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 TTKP33981 857 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 CCR2P41597 374 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 NR4A2P43354 598 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 TRPC1P48995 793 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 GZMMP51124 257 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 PNLIPRP1P54315 467 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ARSFP54793 590 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ABRQ12979 859 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 CSTF3Q12996 717 aaKnown RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 PMS2P11Q13670 270 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ZBED5Q49AG3 693 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 PYCR3Q53H96 274 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ARHGAP15Q53QZ3 475 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 LDLRAP1Q5SW96 308 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 LIPJQ5W064 366 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 FAM180BQ6P0A1 224 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 NEK5Q6P3R8 708 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 TTC33Q6PID6 262 aaPredicted RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 C16orf54Q6UWD8 224 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 MBOAT1Q6ZNC8 495 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 RFLNAQ6ZTI6 216 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 DPPA4Q7L190 304 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 KCTD20Q7Z5Y7 419 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 TMCO2Q7Z6W1 182 aaPredicted RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 ADIPOR2Q86V24 386 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 RALGPS2Q86X27 583 aaPredicted RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 TMEM25Q86YD3 366 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 YAF2Q8IY57 180 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 SVOPLQ8N434 492 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 KRTCAP2Q8N6L1 136 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 TRIML2Q8N7C3 387 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 OR2A12Q8NGT7 310 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 MCOLN3Q8TDD5 553 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 CSGALNACT1Q8TDX6 532 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 WFIKKN2Q8TEU8 576 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 SLC22A17Q8WUG5 538 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ASZ1Q8WWH4 475 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ATL1Q8WXF7 558 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 STARD8Q92502 1023 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 TMBIM1Q969X1 311 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 WDYHV1Q96HA8 205 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ABHD8Q96I13 439 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 REXO5Q96IC2 774 aaKnown RBP4.55□□□□□ -1.68
USP48-202ENST00000374730 ITCHQ96J02 903 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 RNF145Q96MT1 663 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 OR52E6Q96RD3 313 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 SEPHS2Q99611 448 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ZSCAN5AQ9BUG6 496 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 OSBPL10Q9BXB5 764 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 GABARAPL1Q9H0R8 117 aa4.55□□□□□ -1.68
USP48-202ENST00000374730 ELOVL6Q9H5J4 265 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms