RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ZNF385DQ9H6B1 395 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 MRGBPQ9NV56 204 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 FAM120CQ9NX05 1096 aaKnown RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 STMN3Q9NZ72 180 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 NTMQ9P121 344 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 PTGFRNQ9P2B2 879 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 PRODH2Q9UF12 536 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 C19orf53Q9UNZ5 99 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF451Q9Y4E5 1061 aa10.55□□□□□ -0.72
HSPG2-202ENST00000374676 COPG1Q9Y678 874 aaKnown RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 RP1L1Q8IWN7 2480 aaPredicted RBP10.55□□□□□ -0.72
HSPG2-202ENST00000374676 FAM234BA2RU67 622 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 UPK1AO00322 258 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 PRAMEF2O60811 474 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 PSMG1O95456 288 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 PGRP06401 933 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 NCF2P19878 526 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 GPC1P35052 558 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 EMDP50402 254 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 POLR2JP52435 117 aaKnown RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 DGKQP52824 942 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 DCAF7P61962 342 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 LRRC74AQ0VAA2 488 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 HSPB3Q12988 150 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 DUSP8Q13202 625 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 EXOSC7Q15024 291 aaKnown RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 EBPQ15125 230 aaKnown RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 ABHD17BQ5VST6 288 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 B3GNTL1Q67FW5 361 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 TMEM107Q6UX40 140 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 MSANTD1Q6ZTZ1 278 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 SLC29A4Q7RTT9 530 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 CPLX4Q7Z7G2 160 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 FUNDC1Q8IVP5 155 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 C9orf40Q8IXQ3 194 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 ZNF441Q8N8Z8 693 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 SIMC1Q8NDZ2 872 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 C17orf47Q8NEP4 570 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 OR52R1Q8NGF1 315 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 GOT1L1Q8NHS2 421 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 C16orf52Q8NHV5 167 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 C9orf43Q8TAL5 461 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 TM9SF4Q92544 642 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 HAS2Q92819 552 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 ELAC2Q9BQ52 826 aaKnown RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 WWTR1Q9GZV5 400 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 RNF32Q9H0A6 362 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 TAS2R9Q9NYW1 312 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 MYOTQ9UBF9 498 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 BCAP29Q9UHQ4 241 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 BTNL2Q9UIR0 455 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 ADAM21Q9UKJ8 722 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 PCDHGB4Q9UN71 923 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 YARS2Q9Y2Z4 477 aaKnown RBP10.54□□□□□ -0.72
HSPG2-202ENST00000374676 KALRNO60229 2985 aa10.54□□□□□ -0.72
HSPG2-202ENST00000374676 C2orf92A0A1B0GVN3 265 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 DYTNA2CJ06 578 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 TTC36A6NLP5 189 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 EMC8O43402 210 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 SNX3O60493 162 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 SHOX2O60902 331 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 COQ9O75208 318 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 C6orf47O95873 294 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 EFNA1P20827 205 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 TRHRP34981 398 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 MC3RP41968 323 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 PPICP45877 212 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 CDK9P50750 372 aaKnown RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 HBA1P69905 142 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 PIGGQ5H8A4 983 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 HLA-DQA1Q5Y7H0 255 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 FCRLBQ6BAA4 426 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 BLOC1S3Q6QNY0 202 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 TMEM64Q6YI46 380 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 LINC00696Q6ZRV3 163 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 SPATA21Q7Z572 469 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 PIGWQ7Z7B1 504 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 SLC15A4Q8N697 577 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 OR9I1Q8NGQ6 314 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 ADIPOR1Q96A54 375 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 MOAP1Q96BY2 351 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 CCDC115Q96NT0 180 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 OR52E6Q96RD3 313 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 TRIM4Q9C037 500 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 SLC25A18Q9H1K4 315 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 EPN3Q9H201 632 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 EPS8L2Q9H6S3 715 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 TRIM45Q9H8W5 580 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 ZBTB20Q9HC78 741 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 NEUROD4Q9HD90 331 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 SIRT3Q9NTG7 399 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 ABI3Q9P2A4 366 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 ERVK-11Q9UQG0 969 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 TP53TG5Q9Y2B4 290 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 HEMK1Q9Y5R4 338 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-202ENST00000374676 BOD1L1Q8NFC6 3051 aa10.53□□□□□ -0.72
HSPG2-202ENST00000374676 C9JVG2 144 aa10.52□□□□□ -0.73
HSPG2-202ENST00000374676 K7EM74 188 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms