RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 PRSS56P0CW18 603 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 GPX3P22352 226 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 CFL1P23528 166 aaKnown RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 GNRHRP30968 328 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 SPHARQ15513 63 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 C3orf58Q8NDZ4 430 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 HUS1BQ8NHY5 278 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 MYH7BA7E2Y1 1941 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 H3BMQ9 156 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 RETP07949 1114 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF35P13682 527 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 CDK2P24941 298 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 GSTM4Q03013 218 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 BATFQ16520 125 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 FTMTQ8N4E7 242 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 HMGB4Q8WW32 186 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 UTP4Q969X6 686 aaKnown RBP13.55□□□□□ -0.24
LMX1B-202ENST00000373474 COG8Q96MW5 612 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 GPR83Q9NYM4 423 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 LIPT1Q9Y234 373 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 PTGESO14684 152 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 KHNYNO15037 678 aaKnown RBP13.55□□□□□ -0.24
LMX1B-202ENST00000373474 RFPL3O75679 317 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 FHP07954 510 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 BPIP17213 487 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 CELP19835 753 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 FRKP42685 505 aaPredicted RBP13.55□□□□□ -0.24
LMX1B-202ENST00000373474 INHBCP55103 352 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 CD47Q08722 323 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 POU4F2Q12837 409 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 BCL2A1Q16548 175 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.55□□□□□ -0.24
LMX1B-202ENST00000373474 FLYWCH1Q4VC44 716 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 TBC1D15Q8TC07 691 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 OR4K3Q96R72 315 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 DDX60Q8IY21 1712 aaKnown RBP13.55□□□□□ -0.24
LMX1B-202ENST00000373474 C1orf226A1L170 272 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 GRXCR2A6NFK2 248 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 TNFRSF10BO14763 440 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 DNAJB6O75190 326 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 CHRNB1P11230 501 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 CD79BP40259 229 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 BEND4Q6ZU67 534 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 C12orf40Q86WS4 652 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 ELP5Q8TE02 316 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.55□□□□□ -0.24
LMX1B-202ENST00000373474 SDHAF3Q9NRP4 125 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 GPR89AB7ZAQ6 455 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 GPR89BP0CG08 455 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 KEAP1Q14145 624 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 AMZ1Q400G9 498 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 PAGE3Q5JUK9 113 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 ALKBH2Q6NS38 261 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 KDELC1Q6UW63 502 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 C6orf120Q7Z4R8 191 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 ESX1Q8N693 406 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 OR52N2Q8NGI0 321 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 OR4C15Q8NGM1 316 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 COQ10AQ96MF6 247 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 NANSQ9NR45 359 aa13.55□□□□□ -0.24
LMX1B-202ENST00000373474 ZFR2Q9UPR6 939 aaKnown RBP13.55□□□□□ -0.24
LMX1B-202ENST00000373474 M0QZQ0 153 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 OIP5O43482 229 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 B4GALT2O60909 372 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 MITFO75030 526 aaPredicted RBP13.54□□□□□ -0.24
LMX1B-202ENST00000373474 DRD2P14416 443 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 IDH3GP51553 393 aaPredicted RBP13.54□□□□□ -0.24
LMX1B-202ENST00000373474 CAPZA1P52907 286 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 RELAQ04206 551 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 SLAMF1Q13291 335 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 CCDC71Q8IV32 467 aaPredicted RBP13.54□□□□□ -0.24
LMX1B-202ENST00000373474 CLECL1Q8IZS7 167 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 SMPDL3BQ92485 455 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 RAB7BQ96AH8 199 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 ADAMTS5Q9UNA0 930 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 NME7Q9Y5B8 376 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 EIF3FO00303 357 aaPredicted RBP13.54□□□□□ -0.24
LMX1B-202ENST00000373474 TOXO94900 526 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 PTNP21246 168 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 HTR6P50406 440 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 CYCSP99999 105 aaKnown RBP13.54□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF33BQ06732 778 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 EOGTQ5NDL2 527 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 ASPGQ86U10 573 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 NOXA1Q86UR1 476 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 ZSCAN4Q8NAM6 433 aaPredicted RBP13.54□□□□□ -0.24
LMX1B-202ENST00000373474 PLA2G15Q8NCC3 412 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 CHPT1Q8WUD6 406 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 CNOT9Q92600 299 aaKnown RBP13.54□□□□□ -0.24
LMX1B-202ENST00000373474 ABI3Q9P2A4 366 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 OR4C11Q6IEV9 310 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 TMEM205Q6UW68 189 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 NINJ1Q92982 152 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 TMIGD2Q96BF3 282 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 C3orf49Q96BT1 292 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 SECISBP2Q96T21 854 aaKnown RBP13.54□□□□□ -0.24
LMX1B-202ENST00000373474 HK3P52790 923 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 DEFA6Q01524 100 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF789Q5FWF6 425 aa13.54□□□□□ -0.24
LMX1B-202ENST00000373474 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms