RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CTHP32929 405 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ACVR1BP36896 505 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 TAS2R38P59533 333 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ACTBP60709 375 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ACTG1P63261 375 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 NKX3-2P78367 333 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ELAVL3Q14576 367 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 RNASE10Q5GAN6 216 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 MRPL41Q8IXM3 137 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 ST14Q9Y5Y6 855 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 A0A1W2PPK0 400 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 PITPNBP48739 271 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 NPRL3Q12980 569 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 GRB7Q14451 532 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 FAM69BQ5VUD6 431 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 PXKQ7Z7A4 578 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 PLXDC1Q8IUK5 500 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 IGDCC3Q8IVU1 814 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 MARVELD2Q8N4S9 558 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 MINDY1Q8N5J2 469 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 OR14K1Q8NGZ2 314 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 SULT4A1Q9BR01 284 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 HERPUD2Q9BSE4 406 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 GPR174Q9BXC1 333 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 PCDHGA8Q9Y5G5 932 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 RNF215Q9Y6U7 377 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 A8MV72 311 aaPredicted RBP11□□□□□ -0.65
VCL-202ENST00000372755 CLIC3O95833 236 aa11□□□□□ -0.65
VCL-202ENST00000372755 PLATP00750 562 aa11□□□□□ -0.65
VCL-202ENST00000372755 RBMS1P29558 406 aaKnown RBP11□□□□□ -0.65
VCL-202ENST00000372755 LSSP48449 732 aa11□□□□□ -0.65
VCL-202ENST00000372755 CTU1Q7Z7A3 348 aaKnown RBP11□□□□□ -0.65
VCL-202ENST00000372755 TRIM73Q86UV7 250 aa11□□□□□ -0.65
VCL-202ENST00000372755 GALNT6Q8NCL4 622 aa11□□□□□ -0.65
VCL-202ENST00000372755 FBRSQ9HAH7 460 aa11□□□□□ -0.65
VCL-202ENST00000372755 REV1Q9UBZ9 1251 aa11□□□□□ -0.65
VCL-202ENST00000372755 TRIM64CA6NLI5 447 aa11□□□□□ -0.65
VCL-202ENST00000372755 ACTL6BO94805 426 aa11□□□□□ -0.65
VCL-202ENST00000372755 GJB5O95377 273 aa11□□□□□ -0.65
VCL-202ENST00000372755 CNOT4O95628 575 aaKnown RBP11□□□□□ -0.65
VCL-202ENST00000372755 S1PR4O95977 384 aa11□□□□□ -0.65
VCL-202ENST00000372755 CD34P28906 385 aa11□□□□□ -0.65
VCL-202ENST00000372755 PRKXP51817 358 aa11□□□□□ -0.65
VCL-202ENST00000372755 MCCD1P59942 119 aaPredicted RBP11□□□□□ -0.65
VCL-202ENST00000372755 DOC2AQ14183 400 aa11□□□□□ -0.65
VCL-202ENST00000372755 BCL2A1Q16548 175 aa11□□□□□ -0.65
VCL-202ENST00000372755 SERINC5Q86VE9 423 aa11□□□□□ -0.65
VCL-202ENST00000372755 TMEM173Q86WV6 379 aaPredicted RBP11□□□□□ -0.65
VCL-202ENST00000372755 CCDC71LQ8N9Z2 235 aa11□□□□□ -0.65
VCL-202ENST00000372755 OR6Q1Q8NGQ2 317 aa11□□□□□ -0.65
VCL-202ENST00000372755 LRR1Q96L50 414 aa11□□□□□ -0.65
VCL-202ENST00000372755 NSUN5Q96P11 429 aaKnown RBP11□□□□□ -0.65
VCL-202ENST00000372755 ARL6Q9H0F7 186 aa11□□□□□ -0.65
VCL-202ENST00000372755 TP63Q9H3D4 680 aaPredicted RBP11□□□□□ -0.65
VCL-202ENST00000372755 ABRACLQ9P1F3 81 aa11□□□□□ -0.65
VCL-202ENST00000372755 CAMLGP49069 296 aa11□□□□□ -0.65
VCL-202ENST00000372755 AKR1C2P52895 323 aa11□□□□□ -0.65
VCL-202ENST00000372755 TCTE1Q5JU00 501 aa11□□□□□ -0.65
VCL-202ENST00000372755 C6orf183Q5T699 404 aa11□□□□□ -0.65
VCL-202ENST00000372755 GPR157Q5UAW9 335 aa11□□□□□ -0.65
VCL-202ENST00000372755 MANEALQ5VSG8 457 aa11□□□□□ -0.65
VCL-202ENST00000372755 PM20D2Q8IYS1 436 aa11□□□□□ -0.65
VCL-202ENST00000372755 OR5H2Q8NGV7 314 aa11□□□□□ -0.65
VCL-202ENST00000372755 GLYATL2Q8WU03 294 aa11□□□□□ -0.65
VCL-202ENST00000372755 BORCS7Q96B45 105 aa11□□□□□ -0.65
VCL-202ENST00000372755 FCRL3Q96P31 734 aaPredicted RBP11□□□□□ -0.65
VCL-202ENST00000372755 CCDC32Q9BV29 185 aa11□□□□□ -0.65
VCL-202ENST00000372755 FOLH1BQ9HBA9 442 aa11□□□□□ -0.65
VCL-202ENST00000372755 EMC3Q9P0I2 261 aa11□□□□□ -0.65
VCL-202ENST00000372755 TVP23AA6NH52 213 aa11□□□□□ -0.65
VCL-202ENST00000372755 TYROBPO43914 113 aa11□□□□□ -0.65
VCL-202ENST00000372755 STK19P49842 368 aaPredicted RBP11□□□□□ -0.65
VCL-202ENST00000372755 TLE3Q04726 772 aa11□□□□□ -0.65
VCL-202ENST00000372755 GRM7Q14831 915 aa11□□□□□ -0.65
VCL-202ENST00000372755 NTRK2Q16620 822 aa11□□□□□ -0.65
VCL-202ENST00000372755 PHF6Q8IWS0 365 aaKnown RBP eCLIP11□□□□□ -0.65
VCL-202ENST00000372755 OR2B2Q9GZK3 357 aa11□□□□□ -0.65
VCL-202ENST00000372755 C8orf33Q9H7E9 229 aaPredicted RBP11□□□□□ -0.65
VCL-202ENST00000372755 MAS1P04201 325 aa11□□□□□ -0.65
VCL-202ENST00000372755 GRPRP30550 384 aa11□□□□□ -0.65
VCL-202ENST00000372755 CLDN8P56748 225 aa11□□□□□ -0.65
VCL-202ENST00000372755 NNATQ16517 81 aa11□□□□□ -0.65
VCL-202ENST00000372755 UEVLDQ8IX04 471 aa11□□□□□ -0.65
VCL-202ENST00000372755 TEX26Q8N6G2 289 aa11□□□□□ -0.65
VCL-202ENST00000372755 TRMT10AQ8TBZ6 339 aaKnown RBP11□□□□□ -0.65
VCL-202ENST00000372755 MYRFLQ96LU7 910 aa11□□□□□ -0.65
VCL-202ENST00000372755 OR4K3Q96R72 315 aa11□□□□□ -0.65
VCL-202ENST00000372755 CDC6Q99741 560 aa11□□□□□ -0.65
VCL-202ENST00000372755 C14orf119Q9NWQ9 140 aa11□□□□□ -0.65
VCL-202ENST00000372755 ANHXE9PGG2 379 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 FAM227AF5H4B4 570 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 LAMTOR5O43504 91 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 ARHGEF15O94989 841 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 ADAP00813 363 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 AKR1C4P17516 323 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 FDXRP22570 491 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 RNF144AP50876 292 aaPredicted RBP10.99□□□□□ -0.65
VCL-202ENST00000372755 COQ5Q5HYK3 327 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 LEG1Q6P5S2 330 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 SHFQ7M4L6 423 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms