RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 CRISP3P54108 245 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 AQP4P55087 323 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 TRA2AQ13595 282 aaKnown RBP eCLIP24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 ERV3-1Q14264 604 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 PHF19Q5T6S3 580 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 PRAMEF17Q5VTA0 474 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 SLITRK4Q8IW52 837 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 ADAMTS15Q8TE58 950 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 CTHRC1Q96CG8 243 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 OR6C1Q96RD1 312 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 SLC7A5P2Q9GIP4 190 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 LIPT1Q9Y234 373 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 SAC3D1A6NKF1 404 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 H0YJX3 145 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 GNGT2O14610 69 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 FABP3P05413 133 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 ZNF26P17031 533 aaPredicted RBP24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 FBLP22087 321 aaKnown RBP24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 MGAT2Q10469 447 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 MAP4K2Q12851 820 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 MAPK11Q15759 364 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 SYPL1Q16563 259 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 CMPK2Q5EBM0 449 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 ATAD3BQ5T9A4 648 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 CDC73Q6P1J9 531 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 PACRGLQ8N7B6 248 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 TREX2Q9BQ50 279 aaPredicted RBP24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 FTSJ1Q9UET6 329 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 RARRES3Q9UL19 164 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 OAZ3Q9UMX2 235 aa24.61■■□□□ 1.53
ATPAF1-202ENST00000371937 OPN1SWP03999 348 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 ZNF806P0C7X5 589 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 ATP6V1C1P21283 382 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 SOX18P35713 384 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 KCNJ10P78508 379 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 BTG2P78543 158 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 SERTAD2Q14140 314 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 PRAMEF8Q5VWM4 474 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 PRAMEF7Q5VXH5 474 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 PPP4R4Q6NUP7 873 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 ZCCHC12Q6PEW1 402 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 KRT73Q86Y46 540 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 GALNT4Q8N4A0 578 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 C7orf57Q8NEG2 295 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 DGAT2Q96PD7 388 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 PELOQ9BRX2 385 aaKnown RBP24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 NTN4Q9HB63 628 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 BCL2L10Q9HD36 194 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 EXD2Q9NVH0 621 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 MMACHCQ9Y4U1 282 aa24.6■■□□□ 1.53
ATPAF1-202ENST00000371937 PRAMEF27A3QJZ7 478 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 TMEM229AB2RXF0 380 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 TNFRSF10AO00220 468 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 SERPINB7O75635 380 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 RHBDD2Q6NTF9 364 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 PIWIL3Q7Z3Z3 882 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 ARMC8Q8IUR7 673 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 GALNT12Q8IXK2 581 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 VWA5B2Q8N398 1253 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 BBS10Q8TAM1 723 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 RASSF5Q8WWW0 418 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 RIT1Q92963 219 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 NAF1Q96HR8 494 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 BTBD9Q96Q07 612 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 CXorf21Q9HAI6 301 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 CALML5Q9NZT1 146 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 MYO15AQ9UKN7 3530 aa24.59■■□□□ 1.53
ATPAF1-202ENST00000371937 ZNF23P17027 643 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 STT3AP46977 705 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 HSPA13P48723 471 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 IFI44LQ53G44 452 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 RPS26P11Q5JNZ5 115 aaPredicted RBP24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 BPHLQ86WA6 291 aaPredicted RBP24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 OTUB1Q96FW1 271 aaPredicted RBP24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 ADAP2Q9NPF8 381 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 LANCL2Q9NS86 450 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 SIDT1Q9NXL6 827 aaKnown RBP24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 PADI2Q9Y2J8 665 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 TGFBR3LH3BV60 316 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 MAOAP21397 527 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 CSTF2P33240 577 aaKnown RBP eCLIP24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 ARHGAP40Q5TG30 622 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 EPHX4Q8IUS5 362 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 TMBIM1Q969X1 311 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 SPATA5L1Q9BVQ7 753 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 CLDN16Q9Y5I7 305 aa24.58■■□□□ 1.53
ATPAF1-202ENST00000371937 GPR179Q6PRD1 2367 aa24.58■■□□□ 1.52
ATPAF1-202ENST00000371937 A0A0G2JPF8 293 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 HNRNPCL2B2RXH8 293 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 HNRNPCL3B7ZW38 293 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 COQ9O75208 318 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 CT62P0C5K7 136 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 HNRNPCL4P0DMR1 293 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 GALNSP34059 522 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 VLDLRP98155 873 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 GPAT3Q53EU6 434 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 C16orf62Q7Z3J2 963 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 CBR4Q8N4T8 237 aa24.57■■□□□ 1.52
ATPAF1-202ENST00000371937 CDRT4Q8N9R6 151 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms