RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 GPR107Q5VW38 600 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 LIPJQ5W064 366 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 FCRL6Q6DN72 434 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 LCN10Q6JVE6 187 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 TTLL10Q6ZVT0 673 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ASB18Q6ZVZ8 466 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 UBE2R2Q712K3 238 aaPredicted RBP9.78□□□□□ -0.84
COL5A1-202ENST00000371820 SERPINA11Q86U17 422 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 CALHM3Q86XJ0 350 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 FAM26EQ8N5C1 309 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 DTWD1Q8N5C7 304 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 L3MBTL4Q8NA19 623 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 TEX19Q8NA77 164 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 SMYD1Q8NB12 490 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PIK3C3Q8NEB9 887 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 OR2Y1Q8NGV0 311 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 OR2T11Q8NH01 316 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 IPCEF1Q8WWN9 437 aaPredicted RBP9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ASB11Q8WXH4 323 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 NACC2Q96BF6 587 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ITPKCQ96DU7 683 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 COG8Q96MW5 612 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF285Q96NJ3 590 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 MUS81Q96NY9 551 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PKP4Q99569 1192 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 WDR12Q9GZL7 423 aaKnown RBP9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PAIP1Q9H074 479 aaKnown RBP9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PCBD2Q9H0N5 130 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 WDR54Q9H977 334 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 NTN4Q9HB63 628 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PARVBQ9HBI1 364 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 HMG20AQ9NP66 347 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 NECTIN3Q9NQS3 549 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 CUTCQ9NTM9 273 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 CDC14AQ9UNH5 594 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 KLHL20Q9Y2M5 609 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PTRH2Q9Y3E5 179 aaKnown RBP9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF451Q9Y4E5 1061 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 CCL27Q9Y4X3 112 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 POLR3HQ9Y535 204 aaPredicted RBP9.78□□□□□ -0.84
COL5A1-202ENST00000371820 SPTAN1Q13813 2472 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 OR2A25A4D2G3 310 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 FITM1A5D6W6 292 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 SLC22A1O15245 554 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 HCRTR1O43613 425 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 E2F6O75461 281 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 SLC16A8O95907 504 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ONECUT2O95948 504 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 PDGFAP04085 211 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 GP1BBP13224 206 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 NCK1P16333 377 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 DDX5P17844 614 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 OTX2P32243 289 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 GRK3P35626 688 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 RPL3P39023 403 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ASMTP46597 345 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 HSPA7P48741 367 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 CCL11P51671 97 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 CDH15P55291 814 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 VSX2P58304 361 aaPredicted RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 C21orf58P58505 322 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 RPL38P63173 70 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 PPP2R2BQ00005 443 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 PRDX1Q06830 199 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 CSTF3Q12996 717 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 TMED1Q13445 227 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 VEZF1Q14119 521 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ELOAQ14241 798 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 OTUD3Q5T2D3 398 aaPredicted RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ANXA8L1Q5VT79 327 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 C16orf87Q6PH81 154 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 SHQ1Q6PI26 577 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 SUSD1Q6UWL2 747 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ATCAYQ86WG3 371 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ANKRD13BQ86YJ7 626 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ZC3H7AQ8IWR0 971 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 LIX1Q8N485 282 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 CLEC1AQ8NC01 280 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 OR52B6Q8NGF0 335 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ZNF480Q8WV37 535 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 SELENOMQ8WWX9 145 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 FIG4Q92562 907 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 RERGQ96A58 199 aaPredicted RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 MVB12AQ96EY5 273 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 TEX37Q96LM6 180 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 NODALQ96S42 347 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 DPH7Q9BTV6 452 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ACAT2Q9BWD1 397 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 GABARAPL1Q9H0R8 117 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 RAD21L1Q9H4I0 556 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ELOVL6Q9H5J4 265 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 KAT8Q9H7Z6 458 aaKnown RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 CCDC177Q9NQR7 707 aaPredicted RBP9.77□□□□□ -0.85
COL5A1-202ENST00000371820 TAC3Q9UHF0 121 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 ENOPH1Q9UHY7 261 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 PTGDR2Q9Y5Y4 395 aa9.77□□□□□ -0.85
COL5A1-202ENST00000371820 HYKKA2RU49 373 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 UPK1AO00322 258 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 TAPBPO15533 448 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms