RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 COLEC10Q9Y6Z7 277 aa12.11□□□□□ -0.47
GPC3-201ENST00000370818 C12orf71A8MTZ7 269 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 CTRB1P17538 263 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 GABRG2P18507 467 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 OR1E2P47887 323 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 TRA2BP62995 288 aaKnown RBP12.1□□□□□ -0.47
GPC3-201ENST00000370818 SLC35A2P78381 396 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 PRKCDQ05655 676 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 HSPB3Q12988 150 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 TMEM35AQ53FP2 167 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 NDUFAF5Q5TEU4 345 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 CTRB2Q6GPI1 263 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 ZNF425Q6IV72 752 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 FAHD1Q6P587 224 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 AMIGO1Q86WK6 493 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 HORMAD2Q8N7B1 307 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 C12orf4Q9NQ89 552 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 TAS2R7Q9NYW3 318 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 OR6C2Q9NZP2 312 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 KLF15Q9UIH9 416 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 PCOLCE2Q9UKZ9 415 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 PCDHGB6Q9Y5F9 930 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 ORC6Q9Y5N6 252 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 CLDN24A6NM45 220 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 MEN1O00255 615 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 BCKDKO14874 412 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 PRKRAO75569 313 aaKnown RBP12.1□□□□□ -0.47
GPC3-201ENST00000370818 SNX4O95219 450 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 APBB3O95704 486 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 C9P02748 559 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 CHRM5P08912 532 aaPredicted RBP12.1□□□□□ -0.47
GPC3-201ENST00000370818 CD36P16671 472 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 CD72P21854 359 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 EPHA2P29317 976 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 AHRP35869 848 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 UGT2B10P36537 528 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 TGFBR2P37173 567 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 DSTNP60981 165 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 TARDBPQ13148 414 aaKnown RBP eCLIP12.1□□□□□ -0.47
GPC3-201ENST00000370818 GPR50Q13585 617 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 RAPSNQ13702 412 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 CYP27C1Q4G0S4 372 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 EOGTQ5NDL2 527 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 ABHD17CQ6PCB6 329 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 CEACAM20Q6UY09 585 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 LCN9Q8WX39 176 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 EPYCQ99645 322 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 NXF2Q9GZY0 626 aaKnown RBP12.1□□□□□ -0.47
GPC3-201ENST00000370818 NARFLQ9H6Q4 476 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 ZBTB20Q9HC78 741 aaPredicted RBP12.1□□□□□ -0.47
GPC3-201ENST00000370818 PRDM7Q9NQW5 492 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 EHD3Q9NZN3 535 aa12.1□□□□□ -0.47
GPC3-201ENST00000370818 A0A1W2PQ72 361 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 A6NCN8 305 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 C10orf142B7Z368 130 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ERI3O43414 337 aaKnown RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 ANGPTL1O95841 491 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 CYP4B1P13584 511 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 SLC19A1P41440 591 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ACTR1BP42025 376 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ACTR1AP61163 376 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 CTAG1AP78358 180 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 SIM2Q14190 667 aaPredicted RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 FAM214AQ32MH5 1076 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 TBRG1Q3YBR2 411 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 IFI44LQ53G44 452 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 TNFAIP8L2Q6P589 184 aaPredicted RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 NOXA1Q86UR1 476 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 OR8K5Q8NH50 307 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ZBED6CLQ96FA7 236 aaPredicted RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 CDADC1Q9BWV3 514 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 RIBC2Q9H4K1 309 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ACSS1Q9NUB1 689 aaPredicted RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 AASSQ9UDR5 926 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 PCDHGB3Q9Y5G1 929 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 LYVE1Q9Y5Y7 322 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 A3GALT2U3KPV4 340 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 TRBV23OR9-2A0A075B6M9 112 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ISM1B1AKI9 464 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 BTN3A3O00478 584 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 NARSO43776 548 aaKnown RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 PRAMEF10O60809 474 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 RECKO95980 971 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 MT-ND2P03891 347 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 YES1P07947 543 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 JUNDP17535 347 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 HIST1H1TP22492 207 aaPredicted RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 CMPK1P30085 196 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 FMO3P31513 532 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 IL18R1Q13478 541 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 LAIR1Q6GTX8 287 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 MRM1Q6IN84 353 aaKnown RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 C6orf120Q7Z4R8 191 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 ACOT4Q8N9L9 421 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 DNASE1L2Q92874 299 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 RSPO3Q9BXY4 272 aaPredicted RBP12.09□□□□□ -0.47
GPC3-201ENST00000370818 NUAK2Q9H093 628 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 GLIPR2Q9H4G4 154 aa12.09□□□□□ -0.47
GPC3-201ENST00000370818 SERHL2Q9H4I8 314 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms