RNA–Protein interactions for RNA: ENST00000369957.5

MECP2-202, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-202ENST00000369957 TM4SF18Q96CE8 201 aa8.6□□□□□ -1.03
MECP2-202ENST00000369957 RBM18Q96H35 190 aaKnown RBP8.6□□□□□ -1.03
MECP2-202ENST00000369957 MAGED4Q96JG8 741 aa8.6□□□□□ -1.03
MECP2-202ENST00000369957 ADAP2Q9NPF8 381 aa8.6□□□□□ -1.03
MECP2-202ENST00000369957 NECTIN3Q9NQS3 549 aa8.6□□□□□ -1.03
MECP2-202ENST00000369957 CLCA3PQ9Y6N3 262 aa8.6□□□□□ -1.03
MECP2-202ENST00000369957 ZNF780BQ9Y6R6 833 aa8.6□□□□□ -1.03
MECP2-202ENST00000369957 SPG11Q96JI7 2443 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 IGKV3D-11A0A0A0MRZ8 115 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 A8MUA0 341 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 ASNA1O43681 348 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 FGF17O60258 216 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 PRKRAO75569 313 aaKnown RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 ERAL1O75616 437 aaKnown RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 NEURL1O76050 574 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 ALOX15P16050 662 aaPredicted RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 PCSK2P16519 638 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 IGFBP2P18065 325 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 RPL3P39023 403 aaKnown RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 NR0B1P51843 470 aaKnown RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 HNRNPFP52597 415 aaKnown RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 ID2Q02363 134 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 EMX2Q04743 252 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 KIAA0040Q15053 153 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 OR1C1Q15619 314 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 ELAVL1Q15717 326 aaKnown RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 BTBD16Q32M84 506 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 RFTN2Q52LD8 501 aaPredicted RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 KRTCAP3Q53RY4 240 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 C6orf136Q5SQH8 315 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 ZNF468Q5VIY5 522 aaPredicted RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 IL23RQ5VWK5 629 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 PLAG1Q6DJT9 500 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 NXNQ6DKJ4 435 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 SLC48A1Q6P1K1 146 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 RGS9BPQ6ZS82 235 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 ACAD11Q709F0 780 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 IKBIPQ70UQ0 350 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 GALNTL5Q7Z4T8 443 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 R3HCC1LQ7Z5L2 792 aaKnown RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 ZNF227Q86WZ6 799 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 OR4N5Q8IXE1 308 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 LRRC34Q8IZ02 419 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 MARVELD2Q8N4S9 558 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 KLHL29Q96CT2 875 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 C11orf24Q96F05 449 aaPredicted RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 ART5Q96L15 291 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 C3orf30Q96M34 536 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 AKTIPQ9H8T0 292 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 MEAF6Q9HAF1 191 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 MYNNQ9NPC7 610 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 NPDC1Q9NQX5 325 aaPredicted RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 NOP53Q9NZM5 478 aaKnown RBP8.59□□□□□ -1.03
MECP2-202ENST00000369957 EHD3Q9NZN3 535 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 UTS2RQ9UKP6 389 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 MAPRE3Q9UPY8 281 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 PCDHGB6Q9Y5F9 930 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 USH1CQ9Y6N9 552 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 HCFC1P51610 2035 aa8.59□□□□□ -1.03
MECP2-202ENST00000369957 SCN3AQ9NY46 2000 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 SAGE2PA6NJ88 616 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 PGRMC2O15173 223 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 TGDSO95455 350 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 SP1P08047 785 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 VIMP08670 466 aaKnown RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 SLC35E2P0CK97 266 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 TROVE2P10155 538 aaKnown RBP eCLIP8.58□□□□□ -1.04
MECP2-202ENST00000369957 BCKDHAP12694 445 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 PORP16435 677 aaPredicted RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 SDC1P18827 310 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 CSNK2A2P19784 350 aaPredicted RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 DDCP20711 480 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 NTSP30990 170 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 PTGER1P34995 402 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 HPCAL1P37235 193 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 MDH1P40925 334 aaKnown RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 STT3AP46977 705 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 XKP51811 444 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 SLC26A5P58743 744 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 ERVK-8P63133 956 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 RPS6KA2Q15349 733 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 TERF2Q15554 542 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 FAM71E1Q6IPT2 247 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 SPATA19Q7Z5L4 167 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 ST13P4Q8IZP2 240 aaPredicted RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 LIX1Q8N485 282 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 OR14A16Q8NHC5 309 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 CEP70Q8NHQ1 597 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 M1APQ8TC57 530 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 PHF10Q8WUB8 498 aaKnown RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 EXOSC8Q96B26 276 aaKnown RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 ANKRD9Q96BM1 317 aaPredicted RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 SDCCAG3Q96C92 435 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 FCRL1Q96LA6 429 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 ZNF354BQ96LW1 612 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 TSSK3Q96PN8 268 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 BBS4Q96RK4 519 aa8.58□□□□□ -1.04
MECP2-202ENST00000369957 PRPF18Q99633 342 aaKnown RBP8.58□□□□□ -1.04
MECP2-202ENST00000369957 C1orf50Q9BV19 199 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms