RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 EMC3Q9P0I2 261 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ABCD2Q9UBJ2 740 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 TEX13DA0A0J9YY54 714 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ENPP7Q6UWV6 458 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 OR4K14Q8NGD5 310 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF461Q8TAF7 563 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 METTL21AQ8WXB1 218 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 CIDECQ96AQ7 238 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 NPAP1Q9NZP6 1156 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ATPIF1Q9UII2 106 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 HPGDSO60760 199 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ADH5P11766 374 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 UGT2B10P36537 528 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 POU6F2P78424 691 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 GRSF1Q12849 480 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 IRF5Q13568 498 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 GAS6Q14393 721 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 FAM189A2Q15884 450 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ALG1LQ6GMV1 187 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF551Q7Z340 670 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 SCLYQ96I15 445 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 IL17FQ96PD4 163 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 POLDIP3Q9BY77 421 aaKnown RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 RBCK1Q9BYM8 510 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 KLHL9Q9P2J3 617 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 PCDHGB2Q9Y5G2 931 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 NFKBIEO00221 500 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 PVALBP20472 110 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 AK4P27144 223 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 DPP6P42658 865 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ART1P52961 327 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 SLAMF1Q13291 335 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 FLYWCH1Q4VC44 716 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ANKLE1Q8NAG6 615 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 UBXN10Q96LJ8 280 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 TEX10Q9NXF1 929 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 EDDM13A0A1B0GTR0 161 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 TMEM150CB9EJG8 249 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 JUNBP17275 347 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 RPS5P46782 204 aaKnown RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 RAB5BP61020 215 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 MAP4K2Q12851 820 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 FAM180BQ6P0A1 224 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 ZDHHC1Q8WTX9 485 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 HERVK_113Q902F9 699 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 IL20RAQ9UHF4 553 aa15.16■□□□□ 0.02
COL17A1-202ENST00000369733 GPN3Q9UHW5 284 aaPredicted RBP15.16■□□□□ 0.02
COL17A1-202ENST00000369733 A0A0U1RQS6 177 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 HMX2A2RU54 273 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 LEFTY2O00292 366 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 EIF1AYO14602 144 aaKnown RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 STC2O76061 302 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 GNSP15586 552 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 DAPP51397 102 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 CHAF1BQ13112 559 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 PIN1Q13526 163 aaPredicted RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 SIMC1Q8NDZ2 872 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 CNN2Q99439 309 aaKnown RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 THSD1Q9NS62 852 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 PADI2Q9Y2J8 665 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 RNASET2O00584 256 aaKnown RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 FOSL2P15408 326 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF140P52738 457 aaPredicted RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF33BQ06732 778 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 MAPK14Q16539 360 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 KCTD11Q693B1 232 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 WDR20Q8TBZ3 569 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 PHOSPHO1Q8TCT1 267 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 MAFIPQ8WZ33 124 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 SMG9Q9H0W8 520 aaKnown RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 SYT4Q9H2B2 425 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 INSL5Q9Y5Q6 135 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 IRS2Q9Y4H2 1338 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 LOC105369274A0A096LPK9 316 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 GABARAPO95166 117 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 OAZ2O95190 189 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 CHRNB1P11230 501 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 ADRA1AP35348 466 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 RPL35P42766 123 aaKnown RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 GRIN2CQ14957 1233 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 MANEALQ5VSG8 457 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 LRRC69Q6ZNQ3 347 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 NRMQ8IXM6 262 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 OR4N4Q8N0Y3 316 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 OR5H6Q8NGV6 325 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 TMEM41AQ96HV5 264 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 NTMT1Q9BV86 223 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 ARNT2Q9HBZ2 717 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 OR2S2Q9NQN1 319 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 A8MUA0 341 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 GOSR2O14653 212 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 ARPC5O15511 151 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 PET100P0DJ07 73 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 LRIT3Q3SXY7 679 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 Q6ZPB1 254 aaPredicted RBP15.15■□□□□ 0.02
COL17A1-202ENST00000369733 CELF2-AS1Q8N7Q2 184 aa15.15■□□□□ 0.02
COL17A1-202ENST00000369733 A0A1B0GVC2 190 aa15.14■□□□□ 0.01
COL17A1-202ENST00000369733 FEZF1A0PJY2 475 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms