RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TMEM233B4DJY2 109 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 NPIPA5E9PKD4 350 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 LRRTM2O43300 516 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 SNUPNO95149 360 aaKnown RBP9.09□□□□□ -0.95
CD48-202ENST00000368046 P04436 131 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 SERPINE1P05121 402 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 FBXO45P0C2W1 286 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 DHRS4L1P0CG22 281 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 NAGAP17050 411 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 DRD5P21918 477 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 GRK2P25098 689 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 ARRB2P32121 409 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 PPICP45877 212 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 KCNK10P57789 538 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 GPR85P60893 370 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 DCAF7P61962 342 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 RNFT1Q5M7Z0 435 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 RGS9BPQ6ZS82 235 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 IKBIPQ70UQ0 350 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 SIAH3Q8IW03 269 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 DDIASQ8IXT1 998 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 ZNF441Q8N8Z8 693 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 OR2M7Q8NG81 312 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 OR2T11Q8NH01 316 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 ZNF675Q8TD23 568 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 PAQR8Q8TEZ7 354 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 SSC4DQ8WTU2 575 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 TWIST2Q8WVJ9 160 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 RELTQ969Z4 430 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 ADIPOR1Q96A54 375 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 ZBTB9Q96C00 473 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 SPACA9Q96E40 222 aaPredicted RBP9.09□□□□□ -0.95
CD48-202ENST00000368046 EGLN2Q96KS0 407 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 FCRL1Q96LA6 429 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 PPP3R2Q96LZ3 170 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 BBS4Q96RK4 519 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 GAL3ST4Q96RP7 486 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 FAM173AQ9BQD7 235 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 MIEF1Q9NQG6 463 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 SACM1LQ9NTJ5 587 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 DEPPQ9NTK1 212 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 CNIH4Q9P003 139 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 PRODH2Q9UF12 536 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 ERRFI1Q9UJM3 462 aaPredicted RBP9.09□□□□□ -0.95
CD48-202ENST00000368046 NPIPA1Q9UND3 350 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 EXO1Q9UQ84 846 aaKnown RBP9.09□□□□□ -0.95
CD48-202ENST00000368046 ENTPD4Q9Y227 616 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.09□□□□□ -0.95
CD48-202ENST00000368046 NPFFR2Q9Y5X5 522 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 PTGDR2Q9Y5Y4 395 aa9.09□□□□□ -0.95
CD48-202ENST00000368046 CPAMD8Q8IZJ3 1885 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 CNTRLQ7Z7A1 2325 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 ANKRD33BA6NCL7 494 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 TMEM114B3SHH9 223 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 TP53I11O14683 189 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 PIP5K1BO14986 540 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 LSM1O15116 133 aaKnown RBP9.08□□□□□ -0.96
CD48-202ENST00000368046 ITM2AO43736 263 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 PLOD3O60568 738 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 HSPA4LO95757 839 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 CBX7O95931 251 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 ZNF24P17028 368 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 GPX3P22352 226 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 TACR1P25103 407 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 EMDP50402 254 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 SLC18A1P54219 525 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 NRG3P56975 720 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 ABCE1P61221 599 aaKnown RBP9.08□□□□□ -0.96
CD48-202ENST00000368046 PPIAP62937 165 aaKnown RBP9.08□□□□□ -0.96
CD48-202ENST00000368046 EXOSC7Q15024 291 aaKnown RBP9.08□□□□□ -0.96
CD48-202ENST00000368046 LTB4RQ15722 352 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 CHI3L2Q15782 390 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 NTRK2Q16620 822 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 PRSS53Q2L4Q9 553 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 GALNTL6Q49A17 601 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 C4orf17Q53FE4 359 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 ZNF628Q5EBL2 1059 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 PAOXQ6QHF9 649 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 GK5Q6ZS86 529 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 FAM47EQ6ZV65 393 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 SPPL2CQ8IUH8 684 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 GHDCQ8N2G8 530 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 SIMC1Q8NDZ2 872 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 OR52R1Q8NGF1 315 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 CDC26Q8NHZ8 85 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 AGR3Q8TD06 166 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 HSPBAP1Q96EW2 488 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 LCORQ96JN0 433 aaPredicted RBP9.08□□□□□ -0.96
CD48-202ENST00000368046 PKNOX2Q96KN3 472 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 PSMG3-AS1Q96PY0 264 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 SECISBP2Q96T21 854 aaKnown RBP9.08□□□□□ -0.96
CD48-202ENST00000368046 TMBIM4Q9HC24 238 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 SH2D2AQ9NP31 389 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 BAIAP2L1Q9UHR4 511 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 ZNF835Q9Y2P0 537 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 NBASA2RRP1 2371 aa9.08□□□□□ -0.96
CD48-202ENST00000368046 A0A087WV62 115 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 PINLYPA6NC86 204 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 PLOD2O00469 737 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 TFECO14948 347 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms